RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 AKT1S1Q96B36 256 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TMIGD2Q96BF3 282 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GLT1D1Q96MS3 346 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SLC4A9Q96Q91 983 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 NODALQ96S42 347 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 EMILIN2Q9BXX0 1053 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TMCC3Q9ULS5 477 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RGS10O43665 173 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TLL1O43897 1013 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 F7P08709 466 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 LTA4HP09960 611 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FGF3P11487 239 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TGM1P22735 817 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CHI3L1P36222 383 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 LGALS3BPQ08380 585 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 BAMBIQ13145 260 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TKFCQ3LXA3 575 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RNASE12Q5GAN4 147 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM198Q66K66 360 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 STEAP4Q687X5 459 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CHSY3Q70JA7 882 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PHTF2Q8N3S3 785 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FBXO27Q8NI29 283 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GFM1Q96RP9 751 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 STRA6Q9BX79 667 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 HOXD1Q9GZZ0 328 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 REEP1Q9H902 201 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 AGPAT4Q9NRZ5 378 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SLC17A6Q9P2U8 582 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 F8W810 466 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CD3EAPO15446 510 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SULT1B1O43704 296 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SEC22BO75396 215 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RNASEH2AO75792 299 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ABCB1P08183 1280 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 NR4A2P43354 598 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GALNT2Q10471 571 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 DUSP7Q16829 419 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SHQ1Q6PI26 577 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 IL27RAQ6UWB1 636 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 AHSA2Q719I0 299 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RALGPS2Q86X27 583 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PROSER1Q86XN7 944 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RIOX2Q8IUF8 465 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GPC2Q8N158 579 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FAM109AQ8N4B1 249 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 JOSD2Q8TAC2 188 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GIMAP1Q8WWP7 306 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FBXL18Q96ME1 805 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SPATA33Q96N06 139 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ACAD9Q9H845 621 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RGS17Q9UGC6 210 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CNTN6Q9UQ52 1028 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 BAZ2AQ9UIF9 1905 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 UBXN8O00124 270 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ACOT8O14734 319 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 POLR1CO15160 346 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 UGT2B11O75310 529 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 VPS26AO75436 327 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ALDH1A2O94788 518 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CELF2O95319 508 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FTH1P02794 183 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TIE1P35590 1138 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 DDOSTP39656 456 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SLC9A3P48764 834 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF157P51786 506 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ATP12AP54707 1039 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FGD3Q5JSP0 725 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GCNT7Q6ZNI0 430 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 MAP4K3Q8IVH8 894 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TRPV3Q8NET8 790 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 DDX1Q92499 740 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF717Q9BY31 904 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RRAGCQ9HB90 399 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 DDIT4Q9NX09 232 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PCDHGB1Q9Y5G3 927 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CACNA1SQ13698 1873 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM63AO94886 807 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CLIC3O95833 236 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 FEN1P39748 380 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 STARD3Q14849 445 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 USP50Q70EL3 339 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 OTOP1Q7RTM1 612 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CHCHD4Q8N4Q1 142 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CCDC185Q8N715 623 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 VPS37AQ8NEZ2 397 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 OR6Q1Q8NGQ2 317 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CCSER2Q9H7U1 834 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 NIPAL2Q9H841 368 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TSPAN16Q9UKR8 245 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PRG3Q9Y2Y8 225 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 N6AMT1Q9Y5N5 214 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RGPD8O14715 1765 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 KIAA1551Q9HCM1 1747 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 A0A0A0MRY4 1105 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 E5RJQ4 531 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 H3BN98 237 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GABARAPO95166 117 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms