RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 TFB2MQ9H5Q4 396 aaKnown RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 GORASP2Q9H8Y8 452 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 ARNT2Q9HBZ2 717 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 TM9SF3Q9HD45 589 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 IL23AQ9NPF7 189 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 STARD7Q9NQZ5 370 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 SMOXQ9NWM0 555 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 SEPT10Q9P0V9 454 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 DKK3Q9UBP4 350 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 DNAJB9Q9UBS3 223 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 WARS2Q9UGM6 360 aaKnown RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 FBXW11Q9UKB1 542 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 FBXO5Q9UKT4 447 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 TBX21Q9UL17 535 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 ERVK-11Q9UQG0 969 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 WBP11Q9Y2W2 641 aaKnown RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 TCAF1Q9Y4C2 921 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 PCDHB3Q9Y5E6 796 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 TNPO3Q9Y5L0 923 aaKnown RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 SNX9Q9Y5X1 595 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 CPQQ9Y646 472 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 USP3Q9Y6I4 520 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 MYH9P35579 1960 aaKnown RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 PTPRFP10586 1907 aa5.8□□□□□ -1.48
CHD4-206ENST00000536999 MAP1BP46821 2468 aaKnown RBP5.8□□□□□ -1.48
CHD4-206ENST00000536999 FAM170AA1A519 330 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PRR23AA6NEV1 266 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 RRN3P2A6NIE6 340 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 G3V2T6 193 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 STX16-NPEPL1H3BU86 382 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ARNTLO00327 626 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 GNGT2O14610 69 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 STX16O14662 325 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 GABRDO14764 452 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 MATN3O15232 486 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 INPP4BO15327 924 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 SLC16A6O15403 523 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 EEDO75530 441 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 SLC22A3O75751 556 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PRSS23O95084 383 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 MED26O95402 600 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 EPOP01588 193 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 AHSGP02765 367 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 TRAPPC2P0DI81 140 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 TRAPPC2BP0DI82 140 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 CXCL8P10145 99 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 UROSP10746 265 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ZNF24P17028 368 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 GOT1P17174 413 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 TCN1P20061 433 aaPredicted RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 UBA1P22314 1058 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 VARSP26640 1264 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 UGT2B10P36537 528 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 STT3AP46977 705 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ARSFP54793 590 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 CDH8P55286 799 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ARPC4P59998 168 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 JAG1P78504 1218 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ADARB1P78563 741 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 TEKQ02763 1124 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 EMX2Q04743 252 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 SLC10A2Q12908 348 aaPredicted RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 LCP2Q13094 533 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 FADDQ13158 208 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PMS2P3Q13401 168 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ATP1A4Q13733 1029 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 NFYCQ13952 458 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 GRM3Q14832 879 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 MAPRE1Q15691 268 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 KCTD19Q17RG1 926 aaPredicted RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 Q3C1V9 767 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PUS10Q3MIT2 529 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 CYBRD1Q53TN4 286 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 DCAF6Q58WW2 860 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 FBXO47Q5MNV8 452 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 CELF3Q5SZQ8 465 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 C1QTNF12Q5T7M4 302 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PPP1R26Q5T8A7 1209 aaPredicted RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 ANKS6Q68DC2 871 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 IQSEC1Q6DN90 963 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 DUS1LQ6P1R4 473 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 TMEM53Q6P2H8 277 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 NOTUMQ6P988 496 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 BLOC1S3Q6QNY0 202 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 NAPRTQ6XQN6 538 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 PLEKHG7Q6ZR37 379 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 RNF165Q6ZSG1 346 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 LRRC8DQ7L1W4 858 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 BNIPLQ7Z465 357 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 CMC1Q7Z7K0 106 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 ARMC8Q8IUR7 673 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 TMEM151AQ8N4L1 468 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 NKAPQ8N5F7 415 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 PCDH20Q8N6Y1 951 aaKnown RBP5.79□□□□□ -1.48
CHD4-206ENST00000536999 PAF1Q8N7H5 531 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 SETD6Q8TBK2 473 aa5.79□□□□□ -1.48
CHD4-206ENST00000536999 AGR3Q8TD06 166 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms