RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SEPT6Q14141 434 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SMAD2Q15796 467 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC9B1Q4ZJI4 515 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DPY19L3Q6ZPD9 716 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KBTBD2Q8IY47 623 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CPSF7Q8N684 471 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 POU5F2Q8N7G0 328 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FRS2Q8WU20 508 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EZH1Q92800 747 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GATA6Q92908 595 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NR1H4Q96RI1 486 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PHF7Q9BWX1 381 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZDHHC6Q9H6R6 413 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HEBP1Q9NRV9 189 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ELOVL2Q9NXB9 296 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NDE1Q9NXR1 346 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC39A10Q9ULF5 831 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LOC285095A0A1B0GVY8 99 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MEI4A8MW99 385 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 WASH3PC4AMC7 463 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HDAC3O15379 428 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZBTB14O43829 449 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 IGSF6O95976 241 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC4A1P02730 911 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC35E2BP0CK96 405 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NCF2P19878 526 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RPL14P50914 215 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PRKAA1Q13131 559 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 USP10Q14694 798 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CFAP157Q5JU67 520 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PTCRAQ6ISU1 281 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EGFL6Q8IUX8 553 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MAPK15Q8TD08 544 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 WFIKKN2Q8TEU8 576 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FEM1CQ96JP0 617 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TSNARE1Q96NA8 513 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ACOX2Q99424 681 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CCDC28BQ9BUN5 200 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PDP2Q9P2J9 529 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 VTI1BQ9UEU0 232 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TCAF1Q9Y4C2 921 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZNF106Q9H2Y7 1883 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LRRK1Q38SD2 2015 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CCL22O00626 93 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KAT7O95251 611 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NSUN2Q08J23 767 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LRRC73Q5JTD7 316 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EGFLAMQ63HQ2 1017 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FRMD7Q6ZUT3 714 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CENPLQ8N0S6 344 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FBXW8Q8N3Y1 598 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 BLOC1S5Q8TDH9 187 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GPR78Q96P69 363 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZNF385DQ9H6B1 395 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TCF7L2Q9NQB0 619 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TREX1Q9NSU2 369 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SPO11Q9Y5K1 396 aa12.88□□□□□ -0.35
CDK5RAP3-202ENST00000536708 AURKAO14965 403 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GRID2O43424 1007 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DCXO43602 365 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 THRAP10827 490 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARNTP27540 789 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CTHP32929 405 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ABCG1P45844 678 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GRIA4P48058 902 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MTTPP55157 894 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RAB10P61026 200 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 AP1S1P61966 158 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SEMG2Q02383 582 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ASPHQ12797 758 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CCNIQ14094 377 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZNF234Q14588 700 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KIAA0930Q6ICG6 404 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RAPH1Q70E73 1250 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC44A3Q8N4M1 653 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 C2CD4AQ8NCU7 369 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PPHLN1Q8NEY8 458 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 OR52B2Q96RD2 323 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ECSITQ9BQ95 431 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARNT2Q9HBZ2 717 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms