RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 PDX1P52945 283 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 ACTR1AP61163 376 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 CCL7P80098 99 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 SNX1Q13596 522 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 CHRNA6Q15825 494 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 PARP6Q2NL67 630 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 C14orf28Q4W4Y0 310 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 CERCAMQ5T4B2 595 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 FAM151BQ6UXP7 276 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 ARHGEF18Q6ZSZ5 1173 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 C17orf82Q86X59 251 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 NAGSQ8N159 534 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 Q8N9G6 341 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 GLIS1Q8NBF1 620 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 ZDHHC1Q8WTX9 485 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 RTP4Q96DX8 246 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 SRPK1Q96SB4 655 aaKnown RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 TBL1YQ9BQ87 522 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 CDH19Q9H159 772 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 SYNDIG1Q9H7V2 258 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A7Q9HAW7 530 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A10Q9HAW8 530 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A8Q9HAW9 530 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 RAD18Q9NS91 495 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 VPS18Q9P253 973 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 KCNK6Q9Y257 313 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 TRBV23OR9-2A0A075B6M9 112 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 PMS2P1A4D2B8 440 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 TMEM8BA6NDV4 472 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 NTN3O00634 580 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-206ENST00000536429 NUAK1O60285 661 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 CSO75390 466 aaKnown RBP13.02□□□□□ -0.33
PRKDC-206ENST00000536429 ACP5P13686 325 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 SPAM1P38567 509 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 PLA2G4EQ3MJ16 856 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 CHST15Q7LFX5 561 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-206ENST00000536429 PHYKPLQ8IUZ5 450 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 REXO1L1PQ8IX06 675 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 CACTIN-AS1Q8N1I8 211 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 ARL14Q8N4G2 192 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 OR13C4Q8NGS5 318 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 NAT14Q8WUY8 206 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 PLEKHG4BQ96PX9 1271 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
PRKDC-206ENST00000536429 TRIM39Q9HCM9 518 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 HACD3Q9P035 362 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 LRIT1Q9P2V4 623 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 SLC23A2Q9UGH3 650 aa13.02□□□□□ -0.33
PRKDC-206ENST00000536429 ANKRD11Q6UB99 2663 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-206ENST00000536429 ACACAQ13085 2346 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 DSPP15924 2871 aaKnown RBP13.01□□□□□ -0.33
PRKDC-206ENST00000536429 GLYATL1P3A0A0U1RQE8 302 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 CCL22O00626 93 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 GRID2O43424 1007 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 NRDCO43847 1150 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 IFNB1P01574 187 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 FGGP02679 453 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 RPLP0P05388 317 aaKnown RBP13.01□□□□□ -0.33
PRKDC-206ENST00000536429 ZSCAN5DPP0CG00 497 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 GLB1P16278 677 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 TPH1P17752 444 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 TMPRSS15P98073 1019 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 ISXQ2M1V0 245 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 PDPK2PQ6A1A2 396 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 B3GNT8Q7Z7M8 397 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 PROSER1Q86XN7 944 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF547Q8IVP9 402 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 OR4K2Q8NGD2 314 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
PRKDC-206ENST00000536429 ATXN7L3BQ96GX2 97 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 DEPDC7Q96QD5 511 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 VPS35Q96QK1 796 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRKDC-206ENST00000536429 TBC1D29Q9UFV1 150 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 FKBPLQ9UIM3 349 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 APPL1Q9UKG1 709 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 ATXN7L1Q9ULK2 861 aaPredicted RBP13.01□□□□□ -0.33
PRKDC-206ENST00000536429 RAXQ9Y2V3 346 aa13.01□□□□□ -0.33
PRKDC-206ENST00000536429 ARHGEF17Q96PE2 2063 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 COL27A1Q8IZC6 1860 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 A6NCN8 305 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 SRRM3A6NNA2 597 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 CHUKO15111 745 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 PPM1DO15297 605 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 STX7O15400 261 aaKnown RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 B4GAT1O43505 415 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 NUDT21O43809 227 aaKnown RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 CEP104O60308 925 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF189O75820 626 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 AP2A1O95782 977 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 MPOP05164 745 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms