RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 UBA2Q9UBT2 640 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 BTRCQ9Y297 605 aa15.93■□□□□ 0.14
CHMP1A-202ENST00000535997 GREB1Q4ZG55 1949 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 MTMR11A4FU01 709 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 KDELR3O43731 214 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 ACSL4O60488 711 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 UROSP10746 265 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CDH2P19022 906 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 FASP25445 335 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 SCNN1BP51168 640 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CDH4P55283 916 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 RCAN2Q14206 197 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 MDGA1Q8NFP4 955 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 LINC01599Q8WXQ3 324 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 RMND5BQ96G75 393 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 BIRC8Q96P09 236 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CDK5RAP1Q96SZ6 601 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 GPR21Q99679 349 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 GPR62Q9BZJ7 368 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CAAP1Q9H8G2 361 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 C8orf4Q9NR00 106 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 TMEM45AQ9NWC5 275 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 EGFL7Q9UHF1 273 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC8A2Q9UPR5 921 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CEPT1Q9Y6K0 416 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 VWA8A3KMH1 1905 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 ANKRD36A6QL64 1941 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 TANC1Q9C0D5 1861 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 H3BSA7 217 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CDC7O00311 574 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 GPIP06744 558 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 COL6A1P12109 1028 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CR2P20023 1033 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 KCNK10P57789 538 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CAPRIN1Q14444 709 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 PTPRNQ16849 979 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 RGMBQ6NW40 437 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 TRPV3Q8NET8 790 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 OR7D4Q8NG98 312 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CENPNQ96H22 339 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 MYRFLQ96LU7 910 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 ARHGAP39Q9C0H5 1083 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 CRISPLD1Q9H336 500 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 ETAA1Q9NY74 926 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 IKZF3Q9UKT9 509 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 TMCO1Q9UM00 188 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 TIMM22Q9Y584 194 aa15.92■□□□□ 0.14
CHMP1A-202ENST00000535997 A0A1B0GVG6 124 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 KANSL1LA0AUZ9 987 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 VPS26AO75436 327 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 PRLP01236 227 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 LPOP22079 712 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC6A4P31645 630 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 ATP5C1P36542 298 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 ALDH3B2P48448 385 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 TTPAP49638 278 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 ECT2LQ008S8 904 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 MBTPS1Q14703 1052 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 XKR7Q5GH72 579 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 TRAF7Q6Q0C0 670 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 PTRH1Q86Y79 214 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 CBR4Q8N4T8 237 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 HGH1Q9BTY7 390 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 SPON2Q9BUD6 331 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 C9orf16Q9BUW7 83 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 BRINP2Q9C0B6 783 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 AIG1Q9NVV5 245 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 DNMT3LQ9UJW3 386 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 ZFP37Q9Y6Q3 630 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 BTN3A1O00481 513 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 GIPC1O14908 333 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC22A3O75751 556 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 NPPAP01160 153 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 ALDH2P05091 517 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 C7P10643 843 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 FCGR1AP12314 374 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 PKMP14618 531 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 CCND3P30281 292 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC11A2P49281 568 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 CLCN4P51793 760 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 OXCT1P55809 520 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 RNF19BQ6ZMZ0 732 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 TMEM125Q96AQ2 219 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 B3GALT6Q96L58 329 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 NSMCE3Q96MG7 304 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 TDRD1Q9BXT4 1180 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 TMEM161AQ9NX61 479 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 GALPQ9UBC7 116 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 PTBP2Q9UKA9 531 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 PCTPQ9UKL6 214 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 ACTL7AQ9Y615 435 aa15.91■□□□□ 0.14
CHMP1A-202ENST00000535997 GBF1Q92538 1859 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 FRMPD3Q5JV73 1810 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 A0A1B0GTW7 788 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 C9JVG2 144 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 H3BNC9 293 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 ARPC2O15144 300 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 CLDN11O75508 207 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 EEDO75530 441 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 TSPAN12O95859 305 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms