RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 VEGFDO43915 354 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 KCNJ13O60928 360 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 MMP2P08253 660 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 HNRNPH3P31942 346 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 STAT5AP42229 794 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 IFI35P80217 286 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 TYRO3Q06418 890 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 CDC20Q12834 499 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 PTPRRQ15256 657 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 SMTNL2Q2TAL5 461 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 FILIP1LQ4L180 1135 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 ANKRD20A8PQ5CZ79 823 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 ANKS6Q68DC2 871 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 TCTN3Q6NUS6 607 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 BPHLQ86WA6 291 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 KIAA1143Q96AT1 154 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 EID2BQ96D98 161 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 TRIB3Q96RU7 358 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 SRPK1Q96SB4 655 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 ZSCAN5AQ9BUG6 496 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 FAM83DQ9H4H8 585 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 STN1Q9H668 368 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 PCDH9Q9HC56 1237 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 MAGEE1Q9HCI5 957 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 TRIM39Q9HCM9 518 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 NT5MQ9NPB1 228 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 RAD18Q9NS91 495 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 CPNE7Q9UBL6 633 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 TMEM98Q9Y2Y6 226 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 KCTD3Q9Y597 815 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 OAS3Q9Y6K5 1087 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 NBPF19A0A087WUL8 3843 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 ICE1Q9Y2F5 2266 aa11.09□□□□□ -0.63
CLSTN3-206ENST00000535668 HIVEP3Q5T1R4 2406 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 LOC101059948A0A1B0GTJ6 334 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 FADS2P1A8MWK0 482 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 CLDN7O95471 211 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 FGF5P12034 268 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 PPIDQ08752 370 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 NIPAL4Q0D2K0 466 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 BIRC2Q13490 618 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 UBAP2LQ14157 1087 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 QPCTQ16769 361 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 HADHQ16836 314 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 PRSS42Q7Z5A4 293 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 TMC3Q7Z5M5 1100 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 APLFQ8IW19 511 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 MAP7D3Q8IWC1 876 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 PQLC3Q8N755 202 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 PAF1Q8N7H5 531 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 KLHL6Q8WZ60 621 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 AHCYL2Q96HN2 611 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 C9orf72Q96LT7 481 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 NAP1L5Q96NT1 182 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 GBP4Q96PP9 640 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 TIMM29Q9BSF4 260 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 ADGRE3Q9BY15 652 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 THAP2Q9H0W7 228 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 EPN3Q9H201 632 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF768Q9H5H4 540 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 GPN2Q9H9Y4 310 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 RBM22Q9NW64 420 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 PKD2L2Q9NZM6 624 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 OGFRQ9NZT2 677 aa11.08□□□□□ -0.64
CLSTN3-206ENST00000535668 POLEQ07864 2286 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 POLR1CO15160 346 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 NKX2-8O15522 239 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 GRID2O43424 1007 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 MFSD11O43934 449 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 STK17BO94768 372 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 PROSCO94903 275 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 MAP3K6O95382 1288 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 SERPING1P05155 500 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 KRT7P08729 469 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CD48P09326 243 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CTPS1P17812 591 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 ZBED6P86452 979 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 IQCB1Q15051 598 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CCDC122Q5T0U0 273 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CYB5D1Q6P9G0 228 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF517Q6ZMY9 492 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 TMEM26Q6ZUK4 368 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 TRAM1L1Q8N609 369 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CNTD1Q8N815 330 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 C9orf43Q8TAL5 461 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CCHCR1Q8TD31 782 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 SEC14L1Q92503 715 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 HSPH1Q92598 858 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 IMP4Q96G21 291 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 PLEKHG4BQ96PX9 1271 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 VPS35Q96QK1 796 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 MLPHQ9BV36 600 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC40A1Q9NP59 571 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 MLXIPLQ9NP71 852 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 POT1Q9NUX5 634 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 DTLQ9NZJ0 730 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 ANKMY1Q9P2S6 941 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms