RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 BASP1P80723 227 aaKnown RBP22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 XIAPP98170 497 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 KHDC1Q4VXA5 237 aaKnown RBP22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 CERCAMQ5T4B2 595 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 GALNT13Q8IUC8 556 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 SLC35F3Q8IY50 421 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 DNAAF3Q8N9W5 541 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 ADAMTS14Q8WXS8 1223 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 DNAJC1Q96KC8 554 aaKnown RBP22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 OR2AG1Q9H205 316 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 RMI1Q9H9A7 625 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 WASF3Q9UPY6 502 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 PLEKHM1Q9Y4G2 1056 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 GPSM3Q9Y4H4 160 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 PCDHGA1Q9Y5H4 931 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 SCN8AQ9UQD0 1980 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 MROH6A6NGR9 719 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 MTX2O75431 263 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 PRAMEF1O95521 474 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 PSMA3P25788 255 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 TMPRSS15P98073 1019 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 DAB2P98082 770 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 CTBSQ01459 385 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 GPS1Q13098 491 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 SEPT6Q14141 434 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 ZNF398Q8TD17 642 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 SCG3Q8WXD2 468 aaKnown RBP22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 GSDMCQ9BYG8 508 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 SMOXQ9NWM0 555 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 GPR34Q9UPC5 381 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 PRKAB1Q9Y478 270 aa22.49■■□□□ 1.19
SFSWAP-204ENST00000535399 TCRBV7S3A2A0A539 114 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 CCL22O00626 93 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 NUAK1O60285 661 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 SRP72O76094 671 aaKnown RBP22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 TRIM16O95361 564 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 AK4P27144 223 aaPredicted RBP22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 HADHAP40939 763 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 MAGEA6P43360 314 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 ILF3Q12906 894 aaKnown RBP eCLIP22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 FOXC1Q12948 553 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 PEX6Q13608 980 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 ITGA9Q13797 1035 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 NR0B2Q15466 257 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 OGFOD3Q6PK18 319 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 RAB44Q7Z6P3 723 aaPredicted RBP22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 FAM46DQ8NEK8 389 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 GRK7Q8WTQ7 553 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 STYXQ8WUJ0 223 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 DDX47Q9H0S4 455 aaKnown RBP22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 NLE1Q9NVX2 485 aaPredicted RBP22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 NCKIPSDQ9NZQ3 722 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 SIRPGQ9P1W8 387 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 ZNHIT2Q9UHR6 403 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 APPL1Q9UKG1 709 aa22.48■■□□□ 1.19
SFSWAP-204ENST00000535399 GOLGA4Q13439 2230 aaKnown RBP22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 SPEGQ15772 3267 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 GPR89AB7ZAQ6 455 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 H7C0S8 307 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 CHUKO15111 745 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 VEGFDO43915 354 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 RFPL3O75679 317 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 TOP3BO95985 862 aaKnown RBP22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 GAS8O95995 478 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 GPR89BP0CG08 455 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 TPSB2P20231 275 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 CDK16Q00536 496 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 ILKQ13418 452 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 KCNJ11Q14654 390 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 TPSAB1Q15661 275 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 CCDC38Q502W7 563 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 CCDC157Q569K6 752 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 MICALCLQ6ZW33 695 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 CHCHD4Q8N4Q1 142 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 ARL10Q8N8L6 244 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 KYQ8NBH2 561 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 DDHD1Q8NEL9 900 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 GLMNQ92990 594 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 RANBP9Q96S59 729 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 SPATS2LQ9NUQ6 558 aaKnown RBP22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 TAAR2Q9P1P5 351 aa22.47■■□□□ 1.19
SFSWAP-204ENST00000535399 GRID2O43424 1007 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 CASQ1P31415 396 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 DUSP3P51452 185 aaPredicted RBP22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 FOXK2Q01167 660 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 NFATC2Q13469 925 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 LRP8Q14114 963 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 LDLRAP1Q5SW96 308 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 GPRC6AQ5T6X5 926 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 GUSBP11Q6P575 273 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 SYT10Q6XYQ8 523 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 ZNF534Q76KX8 674 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 SFTPA2Q8IWL1 248 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 GPR156Q8NFN8 814 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 GDAP1Q8TB36 358 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 ASB8Q9H765 288 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 EVA1BQ9NVM1 165 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 GULP1Q9UBP9 304 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 RNF14Q9UBS8 474 aa22.46■■□□□ 1.19
SFSWAP-204ENST00000535399 PCYOX1Q9UHG3 505 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms