RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MINDY4Q4G0A6 757 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 PTPN20Q4JDL3 420 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 OLFML2AQ68BL7 652 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 LINGO4Q6UY18 593 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CROCCP3Q8IVE0 287 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CADM2Q8N3J6 435 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 RIPOR3Q96MK2 946 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 MECRQ9BV79 373 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 TDRD1Q9BXT4 1180 aaKnown RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ABCB10Q9NRK6 738 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CD84Q9UIB8 345 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 PTPN2P17706 415 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ACLYP53396 1101 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CDH4P55283 916 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CERS6Q6ZMG9 384 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 C12orf56Q8IXR9 622 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 PIK3C3Q8NEB9 887 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 STYXQ8WUJ0 223 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ING5Q8WYH8 240 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 HOPXQ9BPY8 73 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 TBC1D10AQ9BXI6 508 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 OSER1Q9NX31 292 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 PRPF19Q9UMS4 504 aaKnown RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 FFAR2O15552 330 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CILPO75339 1184 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 LAMP2P13473 410 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 YBEYP58557 167 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 NAE1Q13564 534 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ACAP2Q15057 778 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ZBTB6Q15916 424 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 XKR4Q5GH76 650 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 CHST15Q7LFX5 561 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ATP6V1C2Q8NEY4 427 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ZFP37Q9Y6Q3 630 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 FAM25EA8MYX2 175 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 TRAFD1O14545 582 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 TGFB1I1O43294 461 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ACADLP28330 430 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 HTR7P34969 479 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 USP4Q13107 963 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 FAM129CQ86XR2 697 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 ZDHHC4Q9NPG8 344 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 MFSD11O43934 449 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 STK16O75716 305 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 KIR3DL1P43629 444 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 SMCO1Q147U7 214 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 PIK3R6Q5UE93 754 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 TATDN1Q6P1N9 297 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 INPP4AQ96PE3 977 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 OSBPL11Q9BXB4 747 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 KLF15Q9UIH9 416 aa18.07■□□□□ 0.48
SFSWAP-203ENST00000535236 SERPINA1P01009 418 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 MSANTD2Q6P1R3 559 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CFAP206Q8IYR0 622 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 PJA1Q8NG27 643 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 EMID1Q96A84 441 aaPredicted RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 NPAS2Q99743 824 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 C1QTNF1Q9BXJ1 281 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 DUSP11O75319 330 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CLDN9O95484 217 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 NUDT17P0C025 328 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 AQP1P29972 269 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 HOXC12P31275 282 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 ERICH5Q6P6B1 374 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 POC5Q8NA72 575 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 EXOSC8Q96B26 276 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 DPEP2Q9H4A9 486 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 PNPLA3Q9NST1 481 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 MIOSQ9NXC5 875 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CCDC162PA2VCL2 907 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 FPGTO14772 594 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 SYN3O14994 580 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 TPSB2P20231 275 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CYP3A5P20815 502 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CTSKP43235 329 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CBX5P45973 191 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CAP1Q01518 475 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 TPSAB1Q15661 275 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 RGS21Q2M5E4 152 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 DENND5AQ6IQ26 1287 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 PNPT1Q8TCS8 783 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 NDRG1Q92597 394 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 PLEKHG4BQ96PX9 1271 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CCDC177Q9NQR7 707 aaPredicted RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 OR2AG2A6NM03 316 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 TP73O15350 636 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 PSIP1O75475 530 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 MNDAP41218 407 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 DCTN2Q13561 401 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 GCNT6Q5T4J0 391 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 ATXN7L2Q5T6C5 722 aaPredicted RBP18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 FUKQ8N0W3 1084 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 SLC34A3Q8N130 599 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 PSMA8Q8TAA3 256 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 FCRL4Q96PJ5 515 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 CPXM1Q96SM3 734 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms