RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ELOVL1Q9BW60 279 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 CERS4Q9HA82 394 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 SAMSN1Q9NSI8 373 aaKnown RBP4.32□□□□□ -1.72
ITGB1-219ENST00000534049 ATP8A2Q9NTI2 1148 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 GJB4Q9NTQ9 266 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 RHBDL2Q9NX52 303 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 KIAA1257Q9ULG3 409 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 ZBTB1Q9Y2K1 713 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 L3MBTL1Q9Y468 752 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 NFE2L3Q9Y4A8 694 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 LY75O60449 1722 aa4.32□□□□□ -1.72
ITGB1-219ENST00000534049 NSD3Q9BZ95 1437 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 GRIN2DO15399 1336 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SYNJ2BP-COX16A0A087WUM0 186 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 A0A0J9YVX5 310 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SMIM31A0A1B0GVY4 71 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PVALEFA0A1B0GWK0 134 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 RSPH10B2B2RC85 870 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TMEM114B3SHH9 223 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 AKR1B15C9JRZ8 316 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 GOLGA8RI6L899 631 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TRDMT1O14717 391 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 XPO1O14980 1071 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 NKX2-8O15522 239 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 FIBPO43427 364 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PPP6R2O75170 966 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SERPINB7O75635 380 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 BAIAP3O94812 1187 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ALDOAP04075 364 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 LCKP06239 509 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ITGA2BP08514 1039 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 RFPL3SP0C7P2 107 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 RSPH10BP0C881 870 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 T-ENOLP0DO92 83 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CALM1P0DP23 149 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CALM2P0DP24 149 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CALM3P0DP25 149 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ZNF3P17036 446 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TNFRSF1BP20333 461 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SP100P23497 879 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ANXA13P27216 316 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TMOD1P28289 359 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 RPL9P32969 192 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PHBP35232 272 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PCK1P35558 622 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 GNALP38405 381 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 POLD2P49005 469 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TUFMP49411 452 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SSTP61278 116 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 HPCAP84074 193 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 GALNT1Q10472 559 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 STK4Q13043 487 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 DCTN2Q13561 401 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ANKRD1Q15327 319 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SHROOM1Q2M3G4 852 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ACCSLQ4AC99 568 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 HSP90AA5PQ58FG0 334 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CAVIN4Q5BKX8 364 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ANKRD20A8PQ5CZ79 823 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ANKRD20A2Q5SQ80 823 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PIK3CD-AS1Q5SR53 167 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TTC39AQ5SRH9 613 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CCNJQ5T5M9 372 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ANKRD20A1Q5TYW2 823 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ANKRD20A3Q5VUR7 823 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 METTL11BQ5VVY1 283 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 NAA35Q5VZE5 725 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 KDM7AQ6ZMT4 941 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 RBM43Q6ZSC3 357 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 RASGRP2Q7LDG7 609 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CATSPER4Q7RTX7 472 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CHD1LQ86WJ1 897 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 DDIASQ8IXT1 998 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 HACE1Q8IYU2 909 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 NRSN1Q8IZ57 195 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 KIRREL3Q8IZU9 778 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SPICE1Q8N0Z3 855 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PAQR4Q8N4S7 273 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ARL14EPQ8N8R7 260 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 LINS1Q8NG48 757 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ENKURQ8TC29 256 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 ZNF473Q8WTR7 871 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 STARD8Q92502 1023 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 NPIPB3Q92617 1050 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 LPAR1Q92633 364 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SGK3Q96BR1 496 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TNIP3Q96KP6 325 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CCDC138Q96M89 665 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 GPR78Q96P69 363 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SECISBP2Q96T21 854 aaKnown RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 STK33Q9BYT3 514 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SHCBP1LQ9BZQ2 653 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SFXN1Q9H9B4 322 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 PLEKHA5Q9HAU0 1116 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 SCPEP1Q9HB40 452 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 TRPC7Q9HCX4 862 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 FANCFQ9NPI8 374 aa4.31□□□□□ -1.72
ITGB1-219ENST00000534049 CCDC177Q9NQR7 707 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-219ENST00000534049 C8orf4Q9NR00 106 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms