RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PHTF1Q9UMS5 762 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CHKBQ9Y259 395 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 PCDHB11Q9Y5F2 797 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CREBBPQ92793 2442 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CFAP69A5D8W1 941 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 GOLGA6CA6NDK9 693 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 GOLGA6BA6NDN3 693 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 MYO9AB2RTY4 2548 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 C9orf172C9J069 976 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 TRAFD1O14545 582 aaPredicted RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 TNFRSF10CO14798 259 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 KCNN4O15554 427 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 MTSS1O43312 755 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 PMPCBO75439 489 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 UTP20O75691 2785 aaKnown RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 STK10O94804 968 aaKnown RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 PGLSO95336 258 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 PDHA1P08559 390 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 HOXC4P09017 264 aaPredicted RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 ELFN1P0C7U0 828 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 GOLGA6DP0CG33 693 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 RBP3P10745 1247 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 CYP2A6P11509 494 aaPredicted RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 WT1P19544 449 aaPredicted RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 KELP23276 732 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 PTPN3P26045 913 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 CD82P27701 267 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 PTPN7P35236 360 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 TRIM23P36406 574 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 MAPK10P53779 464 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 CYP4F2P78329 520 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.023e-14■■■□□ 17.4
COPB1-210ENST00000533533 HLTFQ14527 1009 aaKnown RBP eCLIP8.67□□□□□ -1.02
COPB1-210ENST00000533533 ACOX1Q15067 660 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 NOMO1Q15155 1222 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 TEX44Q53QW1 395 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 ZNF569Q5MCW4 686 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 PHF19Q5T6S3 580 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 MEI1Q5TIA1 1274 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 ZNF662Q6ZS27 426 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 USP45Q70EL2 814 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 CNTD1Q8N815 330 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 TTC13Q8NBP0 860 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 SPATA22Q8NHS9 363 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 ARRDC2Q8TBH0 407 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 FUBP1Q96AE4 644 aaKnown RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 ECHDC3Q96DC8 303 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 QKIQ96PU8 341 aaKnown RBP eCLIP8.67□□□□□ -1.027e-9■■■■■ 37.3
COPB1-210ENST00000533533 B3GNT4Q9C0J1 378 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 TMEM168Q9H0V1 697 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 SEMA6CQ9H3T2 930 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 DPEP2Q9H4A9 486 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 GLOD4Q9HC38 313 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 PCDH9Q9HC56 1237 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 MRPL40Q9NQ50 206 aaKnown RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 GEMIN8Q9NWZ8 242 aaKnown RBP8.67□□□□□ -1.02
COPB1-210ENST00000533533 GOLGA6AQ9NYA3 693 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 UBP1Q9NZI7 540 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 B4GALT6Q9UBX8 382 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 RSPH14Q9UHP6 348 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 EFR3BQ9Y2G0 817 aa8.67□□□□□ -1.02
COPB1-210ENST00000533533 B4DGG1 531 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 HTRA2O43464 458 aaPredicted RBP8.66□□□□□ -1.02
COPB1-210ENST00000533533 B4GAT1O43505 415 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 KIF5CO60282 957 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 CEP104O60308 925 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 RECQL5O94762 991 aaPredicted RBP8.66□□□□□ -1.02
COPB1-210ENST00000533533 CPNE6O95741 557 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 MT-CYBP00156 380 aaPredicted RBP8.66□□□□□ -1.02
COPB1-210ENST00000533533 SLC4A1P02730 911 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 NFKB1P19838 968 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 VIPR1P32241 457 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 CXCR5P32302 372 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 B4GALNT1Q00973 533 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 WASHC5Q12768 1159 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 RALGDSQ12967 914 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 XRCC4Q13426 336 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 GALNT3Q14435 633 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 CLCA4Q14CN2 919 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 C16orf72Q14CZ0 275 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 PTPRRQ15256 657 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 MAP9Q49MG5 647 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 COLEC12Q5KU26 742 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 CCDC70Q6NSX1 233 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 LIPIQ6XZB0 460 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
COPB1-210ENST00000533533 DPPA4Q7L190 304 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 PIM3Q86V86 326 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 ZNF567Q8N184 647 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 CCL4L1Q8NHW4 92 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 PDLIM2Q96JY6 352 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 TEKT5Q96M29 485 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 SMIM14Q96QK8 99 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 LGR4Q9BXB1 951 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 TDRD1Q9BXT4 1180 aaKnown RBP8.66□□□□□ -1.02
COPB1-210ENST00000533533 ADGRE3Q9BY15 652 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 SLC25A18Q9H1K4 315 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms