RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PID1Q7Z2X4 250 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 DAAM2Q86T65 1068 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 KATNAL2Q8IYT4 538 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 SFRP1Q8N474 314 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 TRAM1L1Q8N609 369 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 RCBTB1Q8NDN9 531 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 GPR26Q8NDV2 337 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 SLC37A2Q8TED4 501 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 USP7Q93009 1102 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 EID2BQ96D98 161 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
CPSF1-211ENST00000533492 CCNL2Q96S94 520 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-211ENST00000533492 DPYSL5Q9BPU6 564 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 TRIM39Q9HCM9 518 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 ARFGAP3Q9NP61 516 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-211ENST00000533492 ATXN10Q9UBB4 475 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 TBC1D29Q9UFV1 150 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 FAM153AQ9UHL3 310 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 TFR2Q9UP52 801 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
CPSF1-211ENST00000533492 hCG_1818297A0A087WSY0 165 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 IGHV1OR21-1A0A087WYE8 117 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 IGHV5-10-1A0A0J9YXX1 117 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 ERVH48-1M5A8F1 160 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 HGSO14964 777 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-211ENST00000533492 ETV5P41161 510 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 LIMK2P53671 638 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 NAP1L1P55209 391 aaKnown RBP15.28■□□□□ 0.04
CPSF1-211ENST00000533492 DCDC1P59894 354 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 HHEXQ03014 270 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 C19orf57Q0VDD7 668 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 TRA2AQ13595 282 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPSF1-211ENST00000533492 CCDC181Q5TID7 509 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 PDPK2PQ6A1A2 396 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 IYDQ6PHW0 289 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 SLC9B2Q86UD5 537 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 ZNF761Q86XN6 746 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-211ENST00000533492 PHYKPLQ8IUZ5 450 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 OR4D9Q8NGE8 314 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 OR10G6Q8NH81 332 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 SH3KBP1Q96B97 665 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 HAUS1Q96CS2 278 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 CCDC74BQ96LY2 380 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 VAT1Q99536 393 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 HERPUD2Q9BSE4 406 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 ACSL6Q9UKU0 697 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 PCDHB11Q9Y5F2 797 aa15.28■□□□□ 0.04
CPSF1-211ENST00000533492 PCYT1BQ9Y5K3 369 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-211ENST00000533492 EPN1Q9Y6I3 576 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-211ENST00000533492 FASNP49327 2511 aaKnown RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 AHCTF1Q8WYP5 2266 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 PRAMEF33A0A0G2JMD5 474 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 OR5K4A6NMS3 321 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 K7ENP7 123 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 DUX1O43812 170 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 EML2O95834 649 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 PRB1P04280 392 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 LIPCP11150 499 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 ZNF8P17098 575 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 BPIP17213 487 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 NFKB1P19838 968 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 MPSTP25325 297 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 CSTF2P33240 577 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 CD68P34810 354 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 WNT3AP56704 352 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 ADCY2Q08462 1091 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 WASHC5Q12768 1159 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 SQSTM1Q13501 440 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 ZNF648Q5T619 568 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 C11orf63Q6NUN7 778 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 TMEM71Q6P5X7 295 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 TMTC1Q8IUR5 882 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 CCDC112Q8NEF3 446 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 HTR3CQ8WXA8 447 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 GLYATL1Q969I3 302 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 CALR3Q96L12 384 aaKnown RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 PANX2Q96RD6 677 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 HEMGNQ9BXL5 484 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 OSGEPL1Q9H4B0 414 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 BPIFA1Q9NP55 256 aa15.27■□□□□ 0.04
CPSF1-211ENST00000533492 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 NFKBIL1Q9UBC1 381 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-211ENST00000533492 SCN8AQ9UQD0 1980 aa15.27■□□□□ 0.03
CPSF1-211ENST00000533492 MGAQ8IWI9 3026 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 KIR2DS5A0A0G2JLQ3 304 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 A0A0G2JNG1 304 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 HACD1B0YJ81 288 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 GPR89AB7ZAQ6 455 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 H7C0C1 242 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 KIR2DS3K7RE56 304 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 AURKAO14965 403 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 EPOP01588 193 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 GPR89BP0CG08 455 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 CCL4P13236 92 aa15.26■□□□□ 0.03
CPSF1-211ENST00000533492 F3P13726 295 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms