RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RALGPS1Q5JS13 557 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 SPANXN2Q5MJ10 180 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 SWT1Q5T5J6 900 aaKnown RBP17.45■□□□□ 0.38
PHRF1-205ENST00000533464 SERPINA9Q86WD7 417 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 PPCDCQ96CD2 204 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 RPL10LQ96L21 214 aaKnown RBP17.45■□□□□ 0.38
PHRF1-205ENST00000533464 MRPS26Q9BYN8 205 aaKnown RBP17.45■□□□□ 0.38
PHRF1-205ENST00000533464 TLR6Q9Y2C9 796 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 DYTNA2CJ06 578 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 TSPAN19P0C672 248 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF37AP17032 561 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-205ENST00000533464 CCR4P51679 360 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 ANXA8L1Q5VT79 327 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 BHLHB9Q6PI77 547 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 COLGALT2Q8IYK4 626 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF540Q8NDQ6 660 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 KCTD13Q8WZ19 329 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 IKZF3Q9UKT9 509 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 EME2A4GXA9 379 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-205ENST00000533464 NUDT14O95848 222 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 UMPSP11172 480 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 KIR3DL1P43629 444 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 CPTPQ5TA50 214 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 CHST9Q7L1S5 443 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 NUDT4Q9NZJ9 180 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 OR2AG2A6NM03 316 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 NAE1Q13564 534 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 KCNJ11Q14654 390 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 MSS51Q4VC12 460 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 GDF6Q6KF10 455 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-205ENST00000533464 LUZP2Q86TE4 346 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 FERD3LQ96RJ6 166 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 PCYT2Q99447 389 aa17.45■□□□□ 0.38
PHRF1-205ENST00000533464 SUV39H1O43463 412 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 TRBC1P01850 177 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 CHRNGP07510 517 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 KCNE1P15382 129 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SLC6A2P23975 617 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 GPX6P59796 221 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 FGD2Q7Z6J4 655 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 TMPRSS11BQ86T26 416 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 TCAIMQ8N3R3 496 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF655Q8N720 491 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 OR2T34Q8NGX1 318 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 OR2T3Q8NH03 318 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 C10orf82Q8WW14 230 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 VMP1Q96GC9 406 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 CD84Q9UIB8 345 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 MSRAQ9UJ68 235 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ADAM30Q9UKF2 790 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 A0A0U1RQF3 1178 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 NRP1O14786 923 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ATG13O75143 517 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 IRF9Q00978 393 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 INCA1Q0VD86 236 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ATXN7L2Q5T6C5 722 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 RBM44Q6ZP01 1051 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 IFNL1Q8IU54 200 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 OR7A2PQ8NGA2 310 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 PLD4Q96BZ4 506 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 CLK4Q9HAZ1 481 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 IMP3Q9NV31 184 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 GDAP2Q9NXN4 497 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 NEMP2A6NFY4 417 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 OR4F21O95013 312 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ESR1P03372 595 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 HLA-DQB2P05538 268 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 AMD1P17707 334 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 HTR1BP28222 390 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 MAGEA10P43363 369 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 DCTN2Q13561 401 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 GPAT3Q53EU6 434 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 OSTM1Q86WC4 334 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 AP2M1Q96CW1 435 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 AHCYL2Q96HN2 611 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SCLYQ96I15 445 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 OSBPL2Q9H1P3 480 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 CLDN9O95484 217 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 UROSP10746 265 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ALOX12P18054 663 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 PURAQ00577 322 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 PAOXQ6QHF9 649 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SIDT2Q8NBJ9 832 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SMG7Q92540 1137 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SLC47A1Q96FL8 570 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 UNC93B1Q9H1C4 597 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 EIF2B4Q9UI10 523 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 BAZ2AQ9UIF9 1905 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 NPHS1O60500 1241 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 AQP1P29972 269 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ADSLP30566 484 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 LSM3P62310 102 aaKnown RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SLC10A7Q0GE19 358 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 TIMM50Q3ZCQ8 353 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 CEP78Q5JTW2 689 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 RSBN1Q5VWQ0 802 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-205ENST00000533464 C16orf62Q7Z3J2 963 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 C17orf64Q86WR6 236 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms