RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 LHX3Q9UBR4 397 aa15.23■□□□□ 0.03
CACNA1E-208ENST00000533229 FCF1Q9Y324 198 aaKnown RBP15.23■□□□□ 0.03
CACNA1E-208ENST00000533229 YIPF1Q9Y548 306 aa15.23■□□□□ 0.03
CACNA1E-208ENST00000533229 STX7O15400 261 aaKnown RBP15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 KLK8O60259 260 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 CSPG5O95196 566 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 CHRM3P20309 590 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 SYVN1Q86TM6 617 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 CARNMT1Q8N4J0 409 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 MARVELD2Q8N4S9 558 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 LRTOMTQ8WZ04 291 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 BHMTQ93088 406 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 GPATCH1Q9BRR8 931 aaKnown RBP15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 ADGRE3Q9BY15 652 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 SLC52A3Q9NQ40 469 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 SDR39U1Q9NRG7 319 aaPredicted RBP15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 AP4S1Q9Y587 144 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 PCDHB9Q9Y5E1 797 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 C15orf38-AP3S2A0A0A6YYH1 394 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 K7ERQ8 282 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TBL1XO60907 577 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 FESP07332 822 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 CES1P23141 567 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TTPAP49638 278 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 CHN2P52757 468 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 RPL26P61254 145 aaKnown RBP15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TWF1Q12792 350 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 ATXN7L2Q5T6C5 722 aaPredicted RBP15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 SCIMPQ6UWF3 145 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 ARPINQ7Z6K5 226 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 CPNE9Q8IYJ1 553 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 MIER2Q8N344 545 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 NKAPQ8N5F7 415 aaKnown RBP15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 DCBLD1Q8N8Z6 715 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 FAM110BQ8TC76 370 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TEX37Q96LM6 180 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 GBP5Q96PP8 586 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TSC22D3Q99576 134 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 FEM1AQ9BSK4 669 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 PCTPQ9UKL6 214 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 AP4B1Q9Y6B7 739 aa15.22■□□□□ 0.03
CACNA1E-208ENST00000533229 TCRBV3S1A0A5B6 114 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 H0Y626 953 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 NME4O00746 187 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 FZD6O60353 706 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 GREM1O60565 184 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 VPS26AO75436 327 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 PYGLP06737 847 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 ALPIP09923 528 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 ZNF26P17031 533 aaPredicted RBP15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 LBPP18428 481 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 CA5AP35218 305 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 TRAP1Q12931 704 aaKnown RBP15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 TAF12Q16514 161 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 SAMD4BQ5PRF9 694 aaKnown RBP15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 C6orf52Q5T4I8 152 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 TMCO2Q7Z6W1 182 aaPredicted RBP15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 ADAMTS19Q8TE59 1207 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 ROPN1LQ96C74 230 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 LINGO1Q96FE5 620 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 PLEKHG4BQ96PX9 1271 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 TRAPPC9Q96Q05 1148 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 ACOX2Q99424 681 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 C1QTNF3Q9BXJ4 246 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 TRIM8Q9BZR9 551 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 MRPL40Q9NQ50 206 aaKnown RBP15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 STOML2Q9UJZ1 356 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 OR51B4Q9Y5P0 310 aa15.21■□□□□ 0.03
CACNA1E-208ENST00000533229 SYCE1LA8MT33 242 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 H7C0S8 307 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 FXYD1O00168 92 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 AHCYL1O43865 530 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CXCL10P02778 98 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CTPS1P17812 591 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 APLP1P51693 650 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 ATN1P54259 1190 aaPredicted RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 SMAD3P84022 425 aaKnown RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CAPRIN1Q14444 709 aaKnown RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 TAS2R42Q7RTR8 314 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 SLAIN1Q8ND83 568 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 OR6K2Q8NGY2 324 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CFHR5Q9BXR6 569 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 SARS2Q9NP81 518 aaKnown RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 VPS51Q9UID3 782 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 TRMT6Q9UJA5 497 aaKnown RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 RAB26Q9ULW5 256 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 GPR45Q9Y5Y3 372 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 E2F3O00716 465 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 STX16O14662 325 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 AP1G1O43747 822 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 MATN4O95460 622 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 ESRRBO95718 433 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 PRR35P0CG20 571 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 MBL2P11226 248 aaPredicted RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 ZFP36L2P47974 494 aaKnown RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CLCN4P51793 760 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CLCN7P51798 805 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms