RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CRADDP78560 199 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 NFATC2Q13469 925 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ITGA9Q13797 1035 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 DHX34Q14147 1143 aaKnown RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TCEA2Q15560 299 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TRIP6Q15654 476 aaKnown RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 DEFB133Q30KQ1 61 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 PYCR3Q53H96 274 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TSTD2Q5T7W7 516 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 PSAPL1Q6NUJ1 521 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 MARK2Q7KZI7 788 aaKnown RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ADGRG6Q86SQ4 1221 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 GLRX5Q86SX6 157 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 CAND1Q86VP6 1230 aaKnown RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 PPIL6Q8IXY8 311 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 NAT8LQ8N9F0 302 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 MCUQ8NE86 351 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ZNF398Q8TD17 642 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 CDKN2AIPNLQ96HQ2 116 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ZNF778Q96MU6 729 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 CDC6Q99741 560 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 OR2AG1Q9H205 316 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TRIM39Q9HCM9 518 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 SMOXQ9NWM0 555 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ATXN10Q9UBB4 475 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 SLC2A6Q9UGQ3 507 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 RIMKLBQ9ULI2 386 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 TCAF1Q9Y4C2 921 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 PCYT1BQ9Y5K3 369 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ST14Q9Y5Y6 855 aa11.87□□□□□ -0.51
SSBP3-214ENST00000533209 ARID1BQ8NFD5 2236 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 SPAARA0A1B0GVQ0 90 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 AGAP14A8MT82 685 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 AP3B1O00203 1094 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 DNALI1O14645 258 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 TPP1O14773 563 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 CHUKO15111 745 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 YY2O15391 372 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 NUAK1O60285 661 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 AVILO75366 819 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 MTX2O75431 263 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ANXA6P08133 673 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ALPPL2P10696 532 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ZNF8P17098 575 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 MGAT1P26572 445 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 MC4RP32245 332 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 SARNPP82979 210 aaKnown RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ACVR1Q04771 509 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 SKIDA1Q1XH10 827 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 PPM1JQ5JR12 505 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 PCID2Q5JVF3 399 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 LDLRAP1Q5SW96 308 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 GPRC6AQ5T6X5 926 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 NRROSQ86YC3 692 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 GALNT13Q8IUC8 556 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 SDR16C5Q8N3Y7 309 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 DDHD1Q8NEL9 900 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 OR13J1Q8NGT2 312 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 CCL4L1Q8NHW4 92 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 GPBAR1Q8TDU6 330 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ZNF592Q92610 1267 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 CNDP2Q96KP4 475 aaKnown RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 OR2M4Q96R27 311 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 IL22Q9GZX6 179 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ASB8Q9H765 288 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 RMI1Q9H9A7 625 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 CHRAC1Q9NRG0 131 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 TRNAU1APQ9NX07 287 aaKnown RBP11.86□□□□□ -0.51
SSBP3-214ENST00000533209 SYBUQ9NX95 663 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 BFARQ9NZS9 450 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 ZNHIT2Q9UHR6 403 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 PRKAB1Q9Y478 270 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 PLEKHM1Q9Y4G2 1056 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 GPSM3Q9Y4H4 160 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 CACNA1AO00555 2505 aa11.86□□□□□ -0.51
SSBP3-214ENST00000533209 SPTBN2O15020 2390 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 LY6G6EA0A0G2JKS1 128 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 PCNX2A6NKB5 2137 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 GPR89AB7ZAQ6 455 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 TNFSF14O43557 240 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 VEGFDO43915 354 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 CDK14O94921 469 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 LDOC1O95751 146 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-214ENST00000533209 GPR89BP0CG08 455 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 MLNP12872 115 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 ITGALP20701 1170 aa11.85□□□□□ -0.51
SSBP3-214ENST00000533209 MAGEA3P43357 314 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms