RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 EML2O95834 649 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 FGF5P12034 268 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 PBX1P40424 430 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 MAPK9P45984 424 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 CHRNA6Q15825 494 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 RFX8Q6ZV50 586 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
CAPN1-223ENST00000533079 MON1BQ7L1V2 547 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 TMEM135Q86UB9 458 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 PHYKPLQ8IUZ5 450 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 OR6C1Q96RD1 312 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 MGME1Q9BQP7 344 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 GPR87Q9BY21 358 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 ACTL8Q9H568 366 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 CPNE7Q9UBL6 633 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 TBC1D29Q9UFV1 150 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 LNPEPQ9UIQ6 1025 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 PADI1Q9ULC6 663 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 G3BP2Q9UN86 482 aaKnown RBP12.3□□□□□ -0.44
CAPN1-223ENST00000533079 TMEM98Q9Y2Y6 226 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF451Q9Y4E5 1061 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 PCDHGC4Q9Y5F7 938 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 CSMD1Q96PZ7 3565 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 TCRBV5S1A1TA0A578 114 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
CAPN1-223ENST00000533079 DPM1O60762 260 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 DNAJC6O75061 913 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 DNAJB5O75953 348 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 GFPT2O94808 682 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 PGLSO95336 258 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 CLDN1O95832 211 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 LDLRP01130 860 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 CHRNB2P17787 502 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 SLC10A7Q0GE19 358 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 KRT31Q15323 416 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 INPP5JQ15735 1006 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-223ENST00000533079 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 NADK2Q4G0N4 442 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 ARMC12Q5T9G4 340 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 CHST15Q7LFX5 561 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-223ENST00000533079 PRSS42Q7Z5A4 293 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 SYVN1Q86TM6 617 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 TSPAN33Q86UF1 283 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 SLC34A3Q8N130 599 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 NPWQ8N729 165 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 FCRL4Q96PJ5 515 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 TRIM55Q9BYV6 548 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 ABCG8Q9H221 673 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 KCNF1Q9H3M0 494 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 LHX9Q9NQ69 397 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 ACSS2Q9NR19 701 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 ZNHIT2Q9UHR6 403 aa12.29□□□□□ -0.44
CAPN1-223ENST00000533079 DOPEY1Q5JWR5 2465 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 TRBV23OR9-2A0A075B6M9 112 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 TCP11X1B4DZS4 312 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 SPAG6O75602 509 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 UBXN7O94888 489 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 ERCC2P18074 760 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 SOX5P35711 763 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 CLCNKAP51800 687 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 GFERP55789 205 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 JAM2P57087 298 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 UBE2IP63279 158 aaKnown RBP12.28□□□□□ -0.44
CAPN1-223ENST00000533079 TRAF2Q12933 501 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 SYCP1Q15431 976 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 LRRC66Q68CR7 880 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 ARHGAP36Q6ZRI8 547 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 TRIM74Q86UV6 250 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 PSTKQ8IV42 348 aaKnown RBP12.28□□□□□ -0.44
CAPN1-223ENST00000533079 FNIP1Q8TF40 1166 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 CT55Q8WUE5 264 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 TBC1D10AQ9BXI6 508 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 VPS16Q9H269 839 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 GANQ9H2C0 597 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
CAPN1-223ENST00000533079 NOD2Q9HC29 1040 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 CD84Q9UIB8 345 aa12.28□□□□□ -0.44
CAPN1-223ENST00000533079 FBN2P35556 2912 aa12.27□□□□□ -0.44
CAPN1-223ENST00000533079 CENPEQ02224 2701 aa12.27□□□□□ -0.44
CAPN1-223ENST00000533079 CREBBPQ92793 2442 aa12.27□□□□□ -0.44
CAPN1-223ENST00000533079 GPR89AB7ZAQ6 455 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 NRDCO43847 1150 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 RASSF9O75901 435 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 ASMTLO95671 621 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 GPR89BP0CG08 455 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 XRCC1P18887 633 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 CAPZBP47756 277 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 LEPRP48357 1165 aaKnown RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 HCAR3P49019 387 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 RPL7AP62424 266 aaKnown RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 MRPL49Q13405 166 aaKnown RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 ERMARDQ5T6L9 678 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 JMJD6Q6NYC1 403 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 DCUN1D2Q6PH85 259 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 BPHLQ86WA6 291 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 RBM12BQ8IXT5 1001 aaKnown RBP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms