RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RHPN2P1A8MT19 583 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 ATXN7O15265 892 aaPredicted RBP18.77■□□□□ 0.6
SSH3-209ENST00000532600 CST8O60676 142 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 C1QL1O75973 258 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 ALDH4A1P30038 563 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 CSF2RBP32927 897 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 CDK18Q07002 472 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 SLC14A2Q15849 920 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 PCSK7Q16549 785 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 AMZ1Q400G9 498 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 NKAIN2Q5VXU1 208 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 KAZNQ674X7 775 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 PEX26Q7Z412 305 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 TMC3Q7Z5M5 1100 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 GALNT13Q8IUC8 556 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 TEKT5Q96M29 485 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 HERPUD2Q9BSE4 406 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 ZFYVE1Q9HBF4 777 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 ARFGAP3Q9NP61 516 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 UBP1Q9NZI7 540 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 PKD2L2Q9NZM6 624 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 PISDQ9UG56 409 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
SSH3-209ENST00000532600 TRBV23OR9-2A0A075B6M9 112 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 hCG_1818297A0A087WSY0 165 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 TEX51A0A1B0GUA7 166 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 AURKAO14965 403 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 EFSO43281 561 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ASMTLO95671 621 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 CPNE6O95741 557 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 TMPRSS3P57727 454 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 LRP8Q14114 963 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 NOMO1Q15155 1222 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ARHGAP40Q5TG30 622 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ALS2CLQ60I27 953 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 AADACL2Q6P093 401 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 KDELC1Q6UW63 502 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 SYCE1Q8N0S2 351 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 SFRP1Q8N474 314 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 SLC37A2Q8TED4 501 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 SNRNP27Q8WVK2 155 aaKnown RBP18.76■□□□□ 0.59
SSH3-209ENST00000532600 MAGEE1Q9HCI5 957 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ATXN10Q9UBB4 475 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 TBC1D29Q9UFV1 150 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ZNHIT2Q9UHR6 403 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ACSL6Q9UKU0 697 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 TMPRSS11EQ9UL52 423 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 ZNF711Q9Y462 761 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 AHCTF1Q8WYP5 2266 aa18.76■□□□□ 0.59
SSH3-209ENST00000532600 IGHV1OR21-1A0A087WYE8 117 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 IGHV5-10-1A0A0J9YXX1 117 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 A6NCN8 305 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 PMPCBO75439 489 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 GPR3P46089 330 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 NR2C2P49116 596 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 SRSF6Q13247 344 aaKnown RBP18.75■□□□□ 0.59
SSH3-209ENST00000532600 TGIF1Q15583 401 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 MAP9Q49MG5 647 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.75■□□□□ 0.59
SSH3-209ENST00000532600 PHF19Q5T6S3 580 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 CHST15Q7LFX5 561 aaPredicted RBP18.75■□□□□ 0.59
SSH3-209ENST00000532600 ZNF761Q86XN6 746 aaPredicted RBP18.75■□□□□ 0.59
SSH3-209ENST00000532600 RCBTB1Q8NDN9 531 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 CCHCR1Q8TD31 782 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 TFB1MQ8WVM0 346 aaKnown RBP18.75■□□□□ 0.59
SSH3-209ENST00000532600 HES6Q96HZ4 224 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 FOXJ2Q9P0K8 574 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 TMEM9Q9P0T7 183 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 NFKBIL1Q9UBC1 381 aaPredicted RBP18.75■□□□□ 0.59
SSH3-209ENST00000532600 KCNK6Q9Y257 313 aa18.75■□□□□ 0.59
SSH3-209ENST00000532600 PRAMEF33A0A0G2JMD5 474 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 CCDC66A2RUB6 948 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 C9orf172C9J069 976 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 NUAK1O60285 661 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 PRAMEF10O60809 474 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 NDST3O95803 873 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 SLC4A1P02730 911 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 PYGMP11217 842 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 CCL4P13236 92 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 ZNF8P17098 575 aaPredicted RBP18.74■□□□□ 0.59
SSH3-209ENST00000532600 BPIP17213 487 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 NFKB1P19838 968 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 FASLGP48023 281 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 ARSDP51689 593 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 UCNP55089 124 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 DCDC1P59894 354 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 SQSTM1Q13501 440 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 TFDP2Q14188 446 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 KHDC1Q4VXA5 237 aaKnown RBP18.74■□□□□ 0.59
SSH3-209ENST00000532600 TFDP3Q5H9I0 405 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 BROXQ5VW32 411 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 ADGRG6Q86SQ4 1221 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 PIM3Q86V86 326 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 ZC3H18Q86VM9 953 aaKnown RBP18.74■□□□□ 0.59
SSH3-209ENST00000532600 RCOR2Q8IZ40 523 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 PMEPA1Q969W9 287 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 HAUS1Q96CS2 278 aa18.74■□□□□ 0.59
SSH3-209ENST00000532600 OXNAD1Q96HP4 312 aaPredicted RBP18.74■□□□□ 0.59
SSH3-209ENST00000532600 CCDC74BQ96LY2 380 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms