RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CARD9Q9H257 536 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 TRABDQ9H4I3 376 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 C10orf88Q9H8K7 445 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 TRIM39Q9HCM9 518 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 ASCL3Q9NQ33 180 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 SPO11Q9Y5K1 396 aa17.07■□□□□ 0.32
PHRF1-204ENST00000532550 GRID2IPA4D2P6 1211 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 PLD2O14939 933 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 AURKAO14965 403 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 PPM1DO15297 605 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 CPNE6O95741 557 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 PYGMP11217 842 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 BPIP17213 487 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 CCKBRP32239 447 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 PTPN7P35236 360 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 HMGCLP35914 325 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 MLLT3P42568 568 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 EIF3EP60228 445 aaKnown RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 SIRPB2Q5JXA9 342 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 DARS2Q6PI48 645 aaKnown RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 ZNF438Q7Z4V0 828 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 TMEM139Q8IV31 216 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 CDKL3Q8IVW4 592 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 UBL4BQ8N7F7 174 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 LRRC57Q8N9N7 239 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 GLYATL1Q969I3 302 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 OXNAD1Q96HP4 312 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 FSD1LQ9BXM9 530 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 OR2AG1Q9H205 316 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 BPIFA1Q9NP55 256 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 ARFGAP3Q9NP61 516 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 HACD3Q9P035 362 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 ATXN10Q9UBB4 475 aa17.06■□□□□ 0.32
PHRF1-204ENST00000532550 NFKBIL1Q9UBC1 381 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-204ENST00000532550 GPR89AB7ZAQ6 455 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 ANXA9O76027 345 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 GPR89BP0CG08 455 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 RBP3P10745 1247 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 ACP5P13686 325 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 GEMP55040 296 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 ZFP36L1Q07352 338 aaKnown RBP17.05■□□□□ 0.32
PHRF1-204ENST00000532550 PRPSAP1Q14558 356 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 NR1D2Q14995 579 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 SLC1A5Q15758 541 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 CLPPQ16740 277 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-204ENST00000532550 MAP9Q49MG5 647 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 ZDHHC20Q5W0Z9 365 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 USP53Q70EK8 1073 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 PHYKPLQ8IUZ5 450 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 SPACA3Q8IXA5 215 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 KCNE4Q8WWG9 221 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 ALG3Q92685 438 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 CCDC97Q96F63 343 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-204ENST00000532550 PLEKHG4BQ96PX9 1271 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 HERPUD2Q9BSE4 406 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
PHRF1-204ENST00000532550 PCYT1BQ9Y5K3 369 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-204ENST00000532550 PMS2P1A4D2B8 440 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 GOLGA6L9A6NEM1 432 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 CDRT15L2A8MXV6 281 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 MIF4GDA9UHW6 222 aaKnown RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 SNX2O60749 519 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 ITGA2BP08514 1039 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 JMJD7P0C870 316 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 ZNF8P17098 575 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 UGT1A5P35504 534 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 CHRNA4P43681 627 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 PPM1FP49593 454 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 ZNF648Q5T619 568 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 PHF19Q5T6S3 580 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 BROXQ5VW32 411 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 AADACL2Q6P093 401 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 GLT6D1Q7Z4J2 308 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 ADGRG6Q86SQ4 1221 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 BLOC1S5Q8TDH9 187 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 CRELD1Q96HD1 420 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 SLC38A3Q99624 504 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 CMKLR1Q99788 373 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 DPH1Q9BZG8 443 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 GBA3Q9H227 469 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 STN1Q9H668 368 aaKnown RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 RDH14Q9HBH5 336 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 KCNK4Q9NYG8 393 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 AKAP7Q9P0M2 348 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 KCNK6Q9Y257 313 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 AAR2Q9Y312 384 aaKnown RBP17.04■□□□□ 0.32
PHRF1-204ENST00000532550 CACNA1GO43497 2377 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 PTPRQQ9UMZ3 2332 aa17.04■□□□□ 0.32
PHRF1-204ENST00000532550 KCNN4O15554 427 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 KLK10O43240 276 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 VEGFDO43915 354 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 ZNF189O75820 626 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-204ENST00000532550 CDK14O94921 469 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 AGTP01019 485 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 SLC2A4P14672 509 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms