RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 AK4P27144 223 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 SPAM1P38567 509 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 TNNT3P45378 269 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 GNPDA1P46926 289 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 FOXC1Q12948 553 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 ILKQ13418 452 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 ZDHHC20Q5W0Z9 365 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 MARK2Q7KZI7 788 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 GKN2Q86XP6 184 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 CCDC89Q8N998 374 aa13.8□□□□□ -0.2
TSPAN4-220ENST00000532375 UNC13CQ8NB66 2214 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 GLYATL1P3A0A0U1RQE8 302 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 CASC3O15234 703 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 ASMTLO95671 621 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 CRTAMO95727 393 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 MAGEA6P43360 314 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 SMAD1Q15797 465 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 CERCAMQ5T4B2 595 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 GUSBP11Q6P575 273 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 FAM151BQ6UXP7 276 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 ZNF534Q76KX8 674 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 TMPRSS7Q7RTY8 843 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 TAF8Q7Z7C8 310 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 LINC00523Q86TU6 105 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 ZNF547Q8IVP9 402 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 FAM46DQ8NEK8 389 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 ZNF398Q8TD17 642 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 OR2M4Q96R27 311 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 NAP1L3Q99457 506 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 SCNM1Q9BWG6 230 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 OR2AG1Q9H205 316 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 RMI1Q9H9A7 625 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 EIF2B3Q9NR50 452 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 SMOXQ9NWM0 555 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 FKBPLQ9UIM3 349 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 KLK13Q9UKR3 277 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 GPR34Q9UPC5 381 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 PKP3Q9Y446 797 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 PRKAB1Q9Y478 270 aa13.79□□□□□ -0.2
TSPAN4-220ENST00000532375 AKAP13Q12802 2813 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 H7C0S8 307 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 CCL22O00626 93 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 PHF2O75151 1096 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 MTX2O75431 263 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 RFPL3O75679 317 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 SRP72O76094 671 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 EML2O95834 649 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 APRTP07741 180 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 ACTN2P35609 894 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 ARSDP51689 593 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 CLDN6P56747 220 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 CDH17Q12864 832 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 TMEM115Q12893 351 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 POU6F1Q14863 301 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 PERM1Q5SV97 790 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 GPRC6AQ5T6X5 926 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 CCDC137Q6PK04 289 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 C11orf96Q7Z7L8 435 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 ARL10Q8N8L6 244 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 KYQ8NBH2 561 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 DDHD1Q8NEL9 900 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 CCDC97Q96F63 343 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 CDKN2AIPNLQ96HQ2 116 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 DNAJC1Q96KC8 554 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 NAPGQ99747 312 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 TAAR2Q9P1P5 351 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 SLC23A2Q9UGH3 650 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 RABGEF1Q9UJ41 708 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 GPSM3Q9Y4H4 160 aa13.78□□□□□ -0.2
TSPAN4-220ENST00000532375 TRBV5-4A0A0C4DH59 114 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 A6NCN8 305 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GPR89AB7ZAQ6 455 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GRID2O43424 1007 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 SGTAO43765 313 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 VEGFDO43915 354 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 KRT14P02533 472 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GP1BAP07359 652 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GPR89BP0CG08 455 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 PTGIRP43119 386 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 CDKN1CP49918 316 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 DUSP3P51452 185 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 CLCNKAP51800 687 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 TMPRSS15P98073 1019 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 DAB2P98082 770 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 B4GALNT1Q00973 533 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 PDE1BQ01064 536 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 INSM1Q01101 510 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 ACVR1Q04771 509 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 ILF3Q12906 894 aaKnown RBP eCLIP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 HLTFQ14527 1009 aaKnown RBP eCLIP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 KCNJ11Q14654 390 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms