RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	NCOA1	Q15788	1441 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967		A0A1B0GUL7	405 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	C13orf42	A0A1B0GVH6	325 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LNP1	A1A4G5	178 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	C2orf78	A6NCI8	922 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	IFNL4	K9M1U5	179 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CHAD	O15335	359 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ZW10	O43264	779 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LANCL1	O43813	399 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SELENOF	O60613	162 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TBX19	O60806	448 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TIAF1	O95411	115 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	EBLN1	P0CF75	366 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PTEN	P60484	403 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	UBE2I	P63279	158 aa	Known RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CXCL9	Q07325	125 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PPIL2	Q13356	520 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	XRCC4	Q13426	336 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FBXO43	Q4G163	708 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SGO1	Q5FBB7	561 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RARS2	Q5T160	578 aa	Known RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PHF19	Q5T6S3	580 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FAM160B1	Q5W0V3	765 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	AFMID	Q63HM1	303 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TMEM88	Q6PEY1	159 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RHOU	Q7L0Q8	258 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SIAH3	Q8IW03	269 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SNRNP40	Q96DI7	357 aa	Known RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PCYT2	Q99447	389 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CDT1	Q9H211	546 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RHBG	Q9H310	441 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FZD8	Q9H461	694 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	MINDY3	Q9H8M7	445 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ANKZF1	Q9H8Y5	726 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LY9	Q9HBG7	655 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LZTFL1	Q9NQ48	299 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PIH1D3	Q9NQM4	214 aa	Known RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	OR6C3	Q9NZP0	311 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LMCD1	Q9NZU5	365 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GAB2	Q9UQC2	676 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	WBP11	Q9Y2W2	641 aa	Known RBP	5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CMAHP	Q9Y471	501 aa		5.21	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TCRBV5S2	A0A599	114 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PRR33	A8MZF0	331 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CRCP	O75575	148 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PKLR	P30613	574 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FMO4	P31512	558 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SLC6A4	P31645	630 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CRHR1	P34998	444 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ANTXR2	P58335	489 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ACSM1	Q08AH1	577 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CDK5R2	Q13319	367 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GNA13	Q14344	377 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DECR1	Q16698	335 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KRT24	Q2M2I5	525 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ZIK1	Q3SY52	487 aa	Predicted RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	IQCC	Q4KMZ1	466 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NAPEPLD	Q6IQ20	393 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	LEKR1	Q6ZMV7	388 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FAM228A	Q86W67	206 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FMR1NB	Q8N0W7	255 aa	Predicted RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DNAAF3	Q8N9W5	541 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	OR10S1	Q8NGN2	331 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MAFA	Q8NHW3	353 aa	Predicted RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GPT2	Q8TD30	523 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HEXDC	Q8WVB3	486 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FAM163A	Q96GL9	167 aa	Predicted RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PCDHB18P	Q96TA0	734 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DDX47	Q9H0S4	455 aa	Known RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	STOML1	Q9UBI4	398 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CNOT8	Q9UFF9	292 aa	Known RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DNAI1	Q9UI46	699 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MAGEL2	Q9UJ55	1249 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SNX7	Q9UNH6	387 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HBS1L	Q9Y450	684 aa	Known RBP	5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PARD3	Q8TEW0	1356 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PTCH1	Q13635	1447 aa		5.21	□□□□□ -1.58
ECHDC1-222	ENST00000531967		A0A0U1RQS6	177 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NRG2	O14511	850 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CTIF	O43310	598 aa	Known RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	VPS4B	O75351	444 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KAT7	O95251	611 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CYP19A1	P11511	503 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	IL2RB	P14784	551 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RPA2	P15927	270 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DDX5	P17844	614 aa	Known RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GNAZ	P19086	355 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CDC25A	P30304	524 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CDC25C	P30307	473 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ENTPD1	P49961	510 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PDE7A	Q13946	482 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MAPK11	Q15759	364 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PDK4	Q16654	411 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MGAT5B	Q3V5L5	792 aa		5.2	□□□□□ -1.58

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