RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ENPP7Q6UWV6 458 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 FAM151BQ6UXP7 276 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 PIP4P1Q86T03 277 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 PHACTR4Q8IZ21 702 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 SDR16C5Q8N3Y7 309 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 SLC25A45Q8N413 288 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 ZNF398Q8TD17 642 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 PDXPQ96GD0 296 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 SIGLEC10Q96LC7 697 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 RMI1Q9H9A7 625 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 TRIM39Q9HCM9 518 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 CHRAC1Q9NRG0 131 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 DNAJC28Q9NX36 388 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 SYBUQ9NX95 663 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 DLL3Q9NYJ7 618 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 WHRNQ9P202 907 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 KLQ9UEF7 1012 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 SOX13Q9UN79 622 aa14.34□□□□□ -0.11
CPSF1-206ENST00000531480 IGLV3-16A0A075B6K0 115 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 MAGEB16A2A368 324 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 SDR42E2A6NKP2 422 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 INPP4BO15327 924 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 RASGRP1O95267 797 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 JUNDP17535 347 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 DGKAP23743 735 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 MGAT1P26572 445 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 CRADDP78560 199 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 FOXK2Q01167 660 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 BNIP3Q12983 259 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 SEPT6Q14141 434 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 GPR33Q49SQ1 333 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 GLE1Q53GS7 698 aaKnown RBP14.33□□□□□ -0.12
CPSF1-206ENST00000531480 SNX20Q7Z614 316 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 TMEM135Q86UB9 458 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 PHYKPLQ8IUZ5 450 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 BBOF1Q8ND07 529 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 ZNF548Q8NEK5 533 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-206ENST00000531480 PPHLN1Q8NEY8 458 aaKnown RBP14.33□□□□□ -0.12
CPSF1-206ENST00000531480 BAHD1Q8TBE0 780 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-206ENST00000531480 LRRC61Q9BV99 259 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 TCEAL2Q9H3H9 227 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-206ENST00000531480 CAAP1Q9H8G2 361 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 GRHL1Q9NZI5 618 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 SLC2A6Q9UGQ3 507 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 CACNA1AO00555 2505 aa14.33□□□□□ -0.12
CPSF1-206ENST00000531480 FAM237BA0A1B0GVD1 139 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 DCDC2BA2VCK2 349 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 H3BM21 787 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 FLRT2O43155 660 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 GPR39O43194 453 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 VEGFDO43915 354 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 NUAK1O60285 661 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A9O60656 530 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 CBFA2T3O75081 653 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 SLC25A14O95258 325 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A6P19224 532 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 SDHBP21912 280 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A1P22309 533 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A4P22310 534 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 ARNTP27540 789 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 MC4RP32245 332 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 FOXN2P32314 431 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A3P35503 534 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A5P35504 534 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 ITGA8P53708 1063 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 SUZ12Q15022 739 aaKnown RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 KHDC1Q4VXA5 237 aaKnown RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 PYCR3Q53H96 274 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 ZNF542PQ5EBM4 170 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 LDLRAP1Q5SW96 308 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 ADGRG6Q86SQ4 1221 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 TRIM74Q86UV6 250 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 RBFAQ8N0V3 343 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 MPP5Q8N3R9 675 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 FSTL5Q8N475 847 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 GPBAR1Q8TDU6 330 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 TSACCQ96A04 125 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 SLC13A1Q9BZW2 595 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 CLPBQ9H078 707 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 RAB17Q9H0T7 212 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A7Q9HAW7 530 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A10Q9HAW8 530 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UGT1A8Q9HAW9 530 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 MRPL40Q9NQ50 206 aaKnown RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 UCKL1Q9NWZ5 548 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 TRNAU1APQ9NX07 287 aaKnown RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 ATXN10Q9UBB4 475 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 SPASTQ9UBP0 616 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 APOBEC3BQ9UH17 382 aaKnown RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
CPSF1-206ENST00000531480 ARHGEF17Q96PE2 2063 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-206ENST00000531480 PIKFYVEQ9Y2I7 2098 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 CCDC162PA2VCL2 907 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 E7ESA3 106 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 LMO7DNF2Z398 122 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 GOLGA8MH3BSY2 632 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 CCL22O00626 93 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 TPP1O14773 563 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms