RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RPS15P62841 145 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 UBXN1Q04323 297 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 MAMLD1Q13495 774 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 DNASE1L3Q13609 305 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 MAP7Q14244 749 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 KRT31Q15323 416 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 SMTNL2Q2TAL5 461 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PLA2G4EQ3MJ16 856 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 CRTC2Q53ET0 693 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 TDRD12Q587J7 1177 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PPP1R15BQ5SWA1 713 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 IRGCQ6NXR0 463 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 FAM199XQ6PEV8 388 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 TMCO3Q6UWJ1 677 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PHYKPLQ8IUZ5 450 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 ATPAF2Q8N5M1 289 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 CT55Q8WUE5 264 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PLEKHG4BQ96PX9 1271 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 EIF3CQ99613 913 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 HERPUD2Q9BSE4 406 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 FAM83DQ9H4H8 585 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 ETNK2Q9NVF9 386 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 TAS2R14Q9NYV8 317 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 RCOR3Q9P2K3 495 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 MYO1AQ9UBC5 1043 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 SRPK3Q9UPE1 567 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 SIK3Q9Y2K2 1263 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 TNRC6AQ8NDV7 1962 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 KIR2DS5A0A0G2JLQ3 304 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 A0A0G2JNG1 304 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 A0A0J9YYE9 177 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 A6NL46 340 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 KIR2DS3K7RE56 304 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 MAFKO60675 156 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 TRBC1P01850 177 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 MT-ND3P03897 115 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 CCDC172P0C7W6 258 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 RNF224P0DH78 156 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 SSR1P43307 286 aaKnown RBP9.12□□□□□ -0.95
NEDD8-206ENST00000531430 HCAR3P49019 387 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 PMS2P54278 862 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 RPS18P62269 152 aaKnown RBP9.12□□□□□ -0.95
NEDD8-206ENST00000531430 PDE1BQ01064 536 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 MRPL49Q13405 166 aaKnown RBP9.12□□□□□ -0.95
NEDD8-206ENST00000531430 SEMA5AQ13591 1074 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 IL11RAQ14626 422 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 KIR2DS5Q14953 304 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 INPP5JQ15735 1006 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-206ENST00000531430 INSCQ1MX18 579 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 CRTC3Q6UUV7 619 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 PPP1R3BQ86XI6 285 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
NEDD8-206ENST00000531430 ARFGAP1Q8N6T3 406 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 LPCAT1Q8NF37 534 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 ANKRD20A12PQ8NF67 263 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 CCHCR1Q8TD31 782 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 COX14Q96I36 57 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 RUFY1Q96T51 708 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 MGME1Q9BQP7 344 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 TRIM7Q9C029 511 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 OR2AG1Q9H205 316 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 EPB41L1Q9H4G0 881 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 LHX9Q9NQ69 397 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-206ENST00000531430 SLC30A1Q9Y6M5 507 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 UNC79Q9P2D8 2635 aa9.12□□□□□ -0.95
NEDD8-206ENST00000531430 C1orf232A0A0U1RR37 186 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 TMEM191CA6NGB0 347 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 TCP11X1B4DZS4 312 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 SLC25A14O95258 325 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 PEX11BO96011 259 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 SLC4A1P02730 911 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ATXN8OSP0DMR3 200 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 FERP16591 822 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF30P17039 623 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF8P17098 575 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 RPL10P27635 214 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 SLC19A1P41440 591 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 STC1P52823 247 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 CDH6P55285 790 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 DSC2Q02487 901 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 KRT81Q14533 505 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ANKRD20A8PQ5CZ79 823 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 CCDC122Q5T0U0 273 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ALS2CLQ60I27 953 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 CPZQ66K79 652 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 TMEM26Q6ZUK4 368 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 SIDT2Q8NBJ9 832 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 LRRN4Q8WUT4 740 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 MR1Q95460 341 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 CXorf40BQ96DE9 158 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ZDHHC12Q96GR4 267 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 MCCC1Q96RQ3 725 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 MLPHQ9BV36 600 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 SPATA16Q9BXB7 569 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 CLSTN2Q9H4D0 955 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ACTL8Q9H568 366 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 RMI1Q9H9A7 625 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms