RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 TRIM56Q9BRZ2 755 aaKnown RBP13.51□□□□□ -0.25
FDFT1-219ENST00000531249 TCEAL2Q9H3H9 227 aaPredicted RBP13.51□□□□□ -0.25
FDFT1-219ENST00000531249 FGF22Q9HCT0 170 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 TMEM9BQ9NQ34 198 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 WHRNQ9P202 907 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 KLQ9UEF7 1012 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 APPL1Q9UKG1 709 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 TMPRSS11EQ9UL52 423 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
FDFT1-219ENST00000531249 MAD1L1Q9Y6D9 718 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 OAS3Q9Y6K5 1087 aaKnown RBP13.51□□□□□ -0.25
FDFT1-219ENST00000531249 SLC30A1Q9Y6M5 507 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 LAMA1P25391 3075 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 CACNA1EQ15878 2313 aa13.51□□□□□ -0.25
FDFT1-219ENST00000531249 A0A1B0GTQ1 180 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 CCDC162PA2VCL2 907 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 C4orf47A7E2U8 309 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 TP73O15350 636 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 FOXD2O60548 495 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 SDC3O75056 442 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 MTX2O75431 263 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 PRSS56P0CW18 603 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 JUNDP17535 347 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 MAGEA3P43357 314 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 ARRB1P49407 418 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 CDKN1CP49918 316 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 PLTPP55058 493 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 SRP54P61011 504 aaKnown RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 GUCY2DQ02846 1103 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 PPARDQ03181 441 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 DHX9Q08211 1270 aaKnown RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 BNIP3Q12983 259 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 ITGA9Q13797 1035 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 ALG11Q2TAA5 492 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 ZRANB3Q5FWF4 1079 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 PDPK2PQ6A1A2 396 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 CCNI2Q6ZMN8 369 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 TAS2R42Q7RTR8 314 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 RBFAQ8N0V3 343 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 OXR1Q8N573 874 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 OR56A4Q8NGH8 313 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 OR6P1Q8NGX9 317 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 BTN2A2Q8WVV5 523 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 OR1E3Q8WZA6 343 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 MFSD3Q96ES6 412 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 PDXPQ96GD0 296 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 SIGLEC10Q96LC7 697 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 KIFC1Q9BW19 673 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 FRMD8Q9BZ67 464 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 ERVMER34-1Q9H9K5 563 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 CYP4F12Q9HCS2 524 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 GRHL1Q9NZI5 618 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 DMGDHQ9UI17 866 aaKnown RBP13.5□□□□□ -0.25
FDFT1-219ENST00000531249 CRLS1Q9UJA2 301 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 SOX13Q9UN79 622 aa13.5□□□□□ -0.25
FDFT1-219ENST00000531249 SMAPO00193 183 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 NDC80O14777 642 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 GOT2P00505 430 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 CSF2P04141 144 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 CEACAM5P06731 702 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 ITGALP20701 1170 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 CCT8P50990 548 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 ARL4CP56559 192 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 PRAMEP78395 509 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 NFATC2Q13469 925 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 C1orf61Q13536 156 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 SHBQ15464 509 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 HIF1AQ16665 826 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 KHDC1Q4VXA5 237 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 HSP90B2PQ58FF3 399 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 GPRC6AQ5T6X5 926 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 SNX20Q7Z614 316 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 GATAD2AQ86YP4 633 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 IFT20Q8IY31 132 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 PHACTR4Q8IZ21 702 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 PNPLA1Q8N8W4 532 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 EIF1ADQ8N9N8 165 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 ZNF669Q96BR6 464 aaPredicted RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 VPS35Q96QK1 796 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 OR2AG1Q9H205 316 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 CARS2Q9HA77 564 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 MRM3Q9HC36 420 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 EPB41L5Q9HCM4 733 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 MED4Q9NPJ6 270 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 TM7SF3Q9NS93 570 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 TREX1Q9NSU2 369 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 APOBEC3BQ9UH17 382 aaKnown RBP13.49□□□□□ -0.25
FDFT1-219ENST00000531249 RIMKLBQ9ULI2 386 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 SUFUQ9UMX1 484 aa13.49□□□□□ -0.25
FDFT1-219ENST00000531249 FAM186AA6NE01 2351 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms