RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 LRRC71Q8N4P6 559 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 ABHD11Q8NFV4 315 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 GRK7Q8WTQ7 553 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 SETD7Q8WTS6 366 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 DDI1Q8WTU0 396 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TMEM171Q8WVE6 324 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 BORCS5Q969J3 196 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ABTB1Q969K4 478 aaPredicted RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 GJA10Q969M2 543 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 PDXPQ96GD0 296 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 MSANTD3Q96H12 275 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ZSCAN31Q96LW9 406 aaPredicted RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 C7orf26Q96N11 449 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ZNF578Q96N58 590 aaPredicted RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 VPS35Q96QK1 796 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 MMS19Q96T76 1030 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TBCBQ99426 244 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 CCSER1Q9C0I3 900 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 NYXQ9GZU5 481 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 CLPBQ9H078 707 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 PLEKHA4Q9H4M7 779 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ZBTB26Q9HCK0 441 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 DDX4Q9NQI0 724 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 PANK4Q9NVE7 773 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ASNSD1Q9NWL6 643 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ZDHHC7Q9NXF8 308 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 HACD3Q9P035 362 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 GNPTGQ9UJJ9 305 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ADAMTS5Q9UNA0 930 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 STX8Q9UNK0 236 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 AP3M1Q9Y2T2 418 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 PPP2R2CQ9Y2T4 447 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TRPV2Q9Y5S1 764 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 WNT6Q9Y6F9 365 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TTC21AQ8NDW8 1320 aa5.65□□□□□ -1.51
CD44-231ENST00000531110 PASKQ96RG2 1323 aa5.65□□□□□ -1.51
CD44-231ENST00000531110 ZNF335Q9H4Z2 1342 aaPredicted RBP5.65□□□□□ -1.51
CD44-231ENST00000531110 COL15A1P39059 1388 aa5.65□□□□□ -1.51
CD44-231ENST00000531110 RNF17Q9BXT8 1623 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 CYP3A7-CYP3A51PA0A087WV96 503 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 HEATR9A2RTY3 570 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CTAGE9A4FU28 777 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 TRAFD1O14545 582 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 PI15O43692 258 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PLOD3O60568 738 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 TLR2O60603 784 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PSIP1O75475 530 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 JTBO76095 146 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 TRIM16O95361 564 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 LYPLA2O95372 231 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PLEKHA8P1O95397 391 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 GAS8O95995 478 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 TFRCP02786 760 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 NR1D1P20393 614 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CDH3P22223 829 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CYP3A7P24462 503 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CTGFP29279 349 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 GKP32189 559 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CYP2C18P33260 490 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 SHMT1P34896 483 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ATP6V1E1P36543 226 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CD86P42081 329 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 STAT1P42224 750 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 MTIF2P46199 727 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 PIP4K2AP48426 406 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 STARP49675 285 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 GATMP50440 423 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 RASSF2P50749 326 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PGDP52209 483 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 RAP1GDS1P52306 607 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PDE1AP54750 535 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 HADHBP55084 474 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 RAB4BP61018 213 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 STX1BP61266 288 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 HAND2P61296 217 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 GNG11P61952 73 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 SUMO2P61956 95 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 GSTO1P78417 241 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 COG7P83436 770 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PRKG2Q13237 762 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 STX3Q13277 289 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PKP1Q13835 747 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 HNRNPDQ14103 355 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 TGFBIQ15582 683 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CYP1B1Q16678 543 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ZNF829Q3KNS6 432 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 TTMPQ5BVD1 217 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 DGKKQ5KSL6 1271 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 C6orf183Q5T699 404 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 MANEALQ5VSG8 457 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 IZUMO3Q5VZ72 239 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 FAM180BQ6P0A1 224 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 C1orf228Q6PIY5 440 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 NIPA1Q7RTP0 329 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 SLC29A4Q7RTT9 530 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 GSTA5Q7RTV2 222 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CCDC25Q86WR0 208 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ERI1Q8IV48 349 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 SFTPA1Q8IWL2 248 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms