RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	TGFB1I1	O43294	461 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ERBB2	P04626	1255 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ITGB1	P05556	798 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PTPN3	P26045	913 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GSC	P56915	257 aa	Predicted RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SMIM11A	P58511	58 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	MPP1	Q00013	466 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GRM3	Q14832	879 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GRIK4	Q16099	956 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	IL23R	Q5VWK5	629 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	HLA-DQA1	Q5Y7H0	255 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PIGZ	Q86VD9	579 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PTCD2	Q8WV60	388 aa	Known RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	MAGEE1	Q9HCI5	957 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PCDH18	Q9HCL0	1135 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ZNF490	Q9ULM2	529 aa	Predicted RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GIT1	Q9Y2X7	761 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GRIP1	Q9Y3R0	1128 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	CLDN5	O00501	218 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	CCL22	O00626	93 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	CD48	P09326	243 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PTPN1	P18031	435 aa	Known RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PTGIR	P43119	386 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	TUBA3C	Q13748	450 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SMCO1	Q147U7	214 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SH3D19	Q5HYK7	790 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	FBXO42	Q6P3S6	717 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SLC27A1	Q6PCB7	646 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	AFTPH	Q6ULP2	937 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	VSTM1	Q6UX27	236 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GALNTL5	Q7Z4T8	443 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	GALNT6	Q8NCL4	622 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	OR4L1	Q8NH43	312 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	OR10A6	Q8NH74	314 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SPACA7	Q96KW9	195 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	FRMD6	Q96NE9	622 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PURB	Q96QR8	312 aa	Known RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	B3GNT5	Q9BYG0	378 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	FBXO44	Q9H4M3	255 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	CORO2B	Q9UQ03	480 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ZNF536	O15090	1300 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986		H3BM21	787 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ORC5	O43913	435 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	UGT2B17	O75795	530 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ITPKA	P23677	461 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	TTPA	P49638	278 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PSEN1	P49768	467 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	WDR4	P57081	412 aa	Known RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	ILF2	Q12905	390 aa	Known RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	NFE2	Q16621	373 aa	Predicted RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SLC9B1	Q4ZJI4	515 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	SETMAR	Q53H47	684 aa	Predicted RBP	7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	CNTD1	Q8N815	330 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	VGLL2	Q8N8G2	317 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PHC3	Q8NDX5	983 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PIK3R3	Q92569	461 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	PLCL2	Q9UPR0	1127 aa		7.59	□□□□□ -1.19
CTNND1-223	ENST00000529986	OR14I1	A6ND48	311 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	IQCF5	A8MTL0	148 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	SLC30A4	O14863	429 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	TPST2	O60704	377 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	DNAJA2	O60884	412 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	CETP	P11597	493 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	PRKAR2A	P13861	404 aa	Known RBP	7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	CD36	P16671	472 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	BACE1	P56817	501 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	ACTR3	P61158	418 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	GTF2B	Q00403	316 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	PPP1R8	Q12972	351 aa	Known RBP	7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	NOMO1	Q15155	1222 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	HECTD2	Q5U5R9	776 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	FAM171A1	Q5VUB5	890 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	TMEM198	Q66K66	360 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	TUBA3E	Q6PEY2	450 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	ASB18	Q6ZVZ8	466 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	TMEM161B	Q8NDZ6	487 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	ASB12	Q8WXK4	309 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZC3H10	Q96K80	434 aa	Known RBP	7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	ACAT2	Q9BWD1	397 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	DHX33	Q9H6R0	707 aa	Known RBP	7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	ELAC1	Q9H777	363 aa	Known RBP	7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	KCNMB3	Q9NPA1	279 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	MTRR	Q9UBK8	725 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	LGALS13	Q9UHV8	139 aa		7.59	□□□□□ -1.2
CTNND1-223	ENST00000529986	RIC1	Q4ADV7	1423 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	YDJC	A8MPS7	323 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	BOLA2-SMG1P6	H3BVE0	249 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	RECQL4	O94761	1208 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ASL	P04424	464 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	RPLP0	P05388	317 aa	Known RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	CKB	P12277	381 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	FAU	P35544	74 aa	Known RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	CDH12	P55289	794 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MTPN	P58546	118 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	RPL6	Q02878	288 aa	Known RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GBE1	Q04446	702 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MERTK	Q12866	999 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GRB14	Q14449	540 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GPR153	Q6NV75	609 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	TXNDC11	Q6PKC3	985 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms