RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 GALNT13Q8IUC8 556 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 PHYKPLQ8IUZ5 450 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ARL10Q8N8L6 244 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 FAM46DQ8NEK8 389 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 MAGOHBQ96A72 148 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 OR2M4Q96R27 311 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 OR2AG1Q9H205 316 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ARFGAP3Q9NP61 516 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 SMARCAL1Q9NZC9 954 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 SIRPGQ9P1W8 387 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ATXN10Q9UBB4 475 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 GULP1Q9UBP9 304 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNHIT2Q9UHR6 403 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 PADI4Q9UM07 663 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 PLEKHM1Q9Y4G2 1056 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 PCYT1BQ9Y5K3 369 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 PTPRBP23467 1997 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ARHGEF17Q96PE2 2063 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 CPED1A4D0V7 1026 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 GPR89AB7ZAQ6 455 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 GRID2O43424 1007 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 VEGFDO43915 354 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A9O60656 530 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 GPR89BP0CG08 455 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNF8P17098 575 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A6P19224 532 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A1P22309 533 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A4P22310 534 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 AK4P27144 223 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 CA5AP35218 305 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A3P35503 534 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A5P35504 534 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 COILP38432 576 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNF140P52738 457 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 ITGA9Q13797 1035 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 PAPD7Q5XG87 772 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 GALNT15Q8N3T1 639 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 GPR156Q8NFN8 814 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 DPEP2Q9H4A9 486 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A7Q9HAW7 530 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A10Q9HAW8 530 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 UGT1A8Q9HAW9 530 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 SPATS2LQ9NUQ6 558 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 PIH1D1Q9NWS0 290 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 TAAR2Q9P1P5 351 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 FKBPLQ9UIM3 349 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 APPL1Q9UKG1 709 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 KLK13Q9UKR3 277 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 PRKAB1Q9Y478 270 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 NEUROG3Q9Y4Z2 214 aa12.54□□□□□ -0.4
CCDC90B-216ENST00000529856 ASXL3Q9C0F0 2248 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 MROH6A6NGR9 719 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 CHUKO15111 745 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 NOBOXO60393 691 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 MTX2O75431 263 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 SRP72O76094 671 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 CDK14O94921 469 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 APRTP07741 180 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 HADHAP40939 763 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 GRIA1P42261 906 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 XIAPP98170 497 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 CDH17Q12864 832 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 TMEM115Q12893 351 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 PEX6Q13608 980 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 LRP8Q14114 963 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 POU6F1Q14863 301 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 KHDC1Q4VXA5 237 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 CCDC137Q6PK04 289 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 SLC30A9Q6PML9 568 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 PPP1R21Q6ZMI0 780 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 CHST15Q7LFX5 561 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 EFL1Q7Z2Z2 1120 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 TMPRSS12Q86WS5 348 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 C17orf82Q86X59 251 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 DNAAF3Q8N9W5 541 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 KYQ8NBH2 561 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 OR13C4Q8NGS5 318 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 ZDHHC1Q8WTX9 485 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 NAT6Q93015 286 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 NAPGQ99747 312 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 CASS4Q9NQ75 786 aa12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 EIF2B3Q9NR50 452 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 NLE1Q9NVX2 485 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-216ENST00000529856 PLXNB3Q9ULL4 1909 aa12.52□□□□□ -0.4
CCDC90B-216ENST00000529856 ZFC3H1O60293 1989 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-216ENST00000529856 GOLGA6L10A0A0M3HER8 536 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 AGAP14A8MT82 685 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 B4DGG1 531 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 GPR39O43194 453 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 OPA1O60313 960 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 PRAMEF1O95521 474 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 GAS8O95995 478 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms