RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CLK4Q9HAZ1 481 aaKnown RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TMEM51Q9NW97 253 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 PAG1Q9NWQ8 432 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 UBA2Q9UBT2 640 aaPredicted RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 ZNF711Q9Y462 761 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 PCDHGB1Q9Y5G3 927 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 LRRC72A6NJI9 287 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 J3KR12 359 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 VCYO14598 125 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 TBX10O75333 385 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 AVILO75366 819 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 GPC4O75487 556 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 SERPINI2O75830 405 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 VNN2O95498 520 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 CYC1P08574 325 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 ANXA7P20073 488 aaKnown RBP4.58□□□□□ -1.68
C11orf88-204ENST00000529661 HOXC9P31274 260 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 PIGAP37287 484 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 MMP14P50281 582 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 ART1P52961 327 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 GRAPQ13588 217 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 KYNUQ16719 465 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 MMEL1Q495T6 779 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 GGNBP1Q5YKI7 109 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 TYW3Q6IPR3 259 aaKnown RBP4.58□□□□□ -1.68
C11orf88-204ENST00000529661 C18orf65Q6ZTR6 163 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 CACNA2D4Q7Z3S7 1137 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 RBM23Q86U06 439 aaKnown RBP4.58□□□□□ -1.68
C11orf88-204ENST00000529661 EPHX4Q8IUS5 362 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 POMGNT2Q8NAT1 580 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 FAM216AQ8WUB2 273 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 TMCO6Q96DC7 493 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 LMLNQ96KR4 655 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 GAD1Q99259 594 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 PCGF1Q9BSM1 259 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 KLHL4Q9C0H6 718 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 DENND2DQ9H6A0 471 aaPredicted RBP4.58□□□□□ -1.68
C11orf88-204ENST00000529661 MMP25Q9NPA2 562 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 OCIAD1Q9NX40 245 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 PSD3Q9NYI0 1048 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 OR6C3Q9NZP0 311 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 FBXW11Q9UKB1 542 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 RCOR1Q9UKL0 485 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 ACSL5Q9ULC5 683 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 PLAGL1Q9UM63 463 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 CLIC4Q9Y696 253 aa4.58□□□□□ -1.68
C11orf88-204ENST00000529661 hCG_1809904A0A1W2PP81 198 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 A0A1W2PPE2 198 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 A0A1W2PR64 198 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 CLEC18AA5D8T8 446 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 ATP2A1O14983 1001 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 OGG1O15527 345 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 ZBTB11O95625 1053 aaPredicted RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 MMP9P14780 707 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 HNRNPH1P31943 449 aaKnown RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 GPR143P51810 404 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 UBXN2AP68543 259 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 CXCL9Q07325 125 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 TRAF3Q13114 568 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 KCNC3Q14003 757 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 DLG2Q15700 870 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 PNLIPRP3Q17RR3 467 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 SPECC1Q5M775 1068 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 ADALQ6DHV7 355 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 B3GNT6Q6ZMB0 384 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 AACSQ86V21 672 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 SCYL3Q8IZE3 742 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 CLIP4Q8N3C7 705 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 MINDY1Q8N5J2 469 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 AADATQ8N5Z0 425 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 TDRD5Q8NAT2 981 aaKnown RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 POGLUT1Q8NBL1 392 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 CLEC18CQ8NCF0 446 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 APPL2Q8NEU8 664 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 LMO3Q8TAP4 145 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 PTPMT1Q8WUK0 201 aaPredicted RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 CNDP2Q96KP4 475 aaKnown RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 PAFAH2Q99487 392 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 SLC25A33Q9BSK2 321 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 PPP1R3EQ9H7J1 279 aa4.57□□□□□ -1.68
C11orf88-204ENST00000529661 CCDC177Q9NQR7 707 aaPredicted RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 ACSS1Q9NUB1 689 aaPredicted RBP4.57□□□□□ -1.68
C11orf88-204ENST00000529661 LOC102723996A0A087X1L8 192 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 EME2A4GXA9 379 aaPredicted RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 SMAD9O15198 467 aaKnown RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 HSPA12AO43301 675 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 ICAM1P05362 532 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 APOA4P06727 396 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 TPOP07202 933 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 ZNF12P17014 697 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 UBA1P22314 1058 aaKnown RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 EIF2S3P41091 472 aaKnown RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 LIG4P49917 911 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 MXI1P50539 228 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 PPP5CP53041 499 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 SEC61A1P61619 476 aaKnown RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 BNC1Q01954 994 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 PSMD6Q15008 389 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms