RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 PPANQ9NQ55 473 aaKnown RBP13.8□□□□□ -0.2
BEST1-206ENST00000529265 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
BEST1-206ENST00000529265 RAPGEFL1Q9UHV5 662 aa13.8□□□□□ -0.2
BEST1-206ENST00000529265 SLC6A14Q9UN76 642 aa13.8□□□□□ -0.2
BEST1-206ENST00000529265 ANKRD6Q9Y2G4 727 aa13.8□□□□□ -0.2
BEST1-206ENST00000529265 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.8□□□□□ -0.2
BEST1-206ENST00000529265 FAM169AQ9Y6X4 670 aa13.8□□□□□ -0.2
BEST1-206ENST00000529265 ZCWPW2A0A1B0GU75 182 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 CD3EAPO15446 510 aaKnown RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 MTX2O75431 263 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 SYPP08247 313 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 HOXC4P09017 264 aaPredicted RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 PRSS56P0CW18 603 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 MCM3P25205 808 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 PMLP29590 882 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 ECHS1P30084 290 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 FOXN2P32314 431 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 PPARGP37231 505 aaPredicted RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 KIAA1024LP59773 190 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 LDLRAP1Q5SW96 308 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 PSAPL1Q6NUJ1 521 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 SLC23A3Q6PIS1 610 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 MACC1Q6ZN28 852 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 SLC22A18ASQ8N1D0 253 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 DCUN1D1Q96GG9 259 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 WDR83Q9BRX9 315 aaKnown RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 IL1RAPL1Q9NZN1 696 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 KLQ9UEF7 1012 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 CNOT6Q9ULM6 557 aaKnown RBP13.79□□□□□ -0.2
BEST1-206ENST00000529265 TMEM98Q9Y2Y6 226 aa13.79□□□□□ -0.2
BEST1-206ENST00000529265 VPS13AQ96RL7 3174 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SPTY2D1-AS1A0A0U1RR47 76 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 PFDN6O15212 129 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 RALBP11234 206 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 MSH3P20585 1137 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 ARCN1P48444 511 aaKnown RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 NXPH1P58417 271 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 NHLH1Q02575 133 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 CBLBQ13191 982 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 GTF2H3Q13889 308 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SLMAPQ14BN4 828 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 KIF19Q2TAC6 998 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 AARS2Q5JTZ9 985 aaKnown RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 ZNF648Q5T619 568 aaPredicted RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 GPRC6AQ5T6X5 926 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 LYPLAL1Q5VWZ2 237 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 MRNIPQ6NTE8 343 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 NEPROQ6NW34 567 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 CCNI2Q6ZMN8 369 aaPredicted RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 RD3Q7Z3Z2 195 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SDCCAG8Q86SQ7 713 aaPredicted RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 KCNMB4Q86W47 210 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 PARGQ86W56 976 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 NXPE1Q8N323 547 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 GSDMBQ8TAX9 411 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 CALML6Q8TD86 181 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 COX14Q96I36 57 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 COPS8Q99627 209 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 ZCCHC2Q9C0B9 1178 aaKnown RBP13.78□□□□□ -0.2
BEST1-206ENST00000529265 OR2AG1Q9H205 316 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 TRIM39Q9HCM9 518 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 FSCN3Q9NQT6 498 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SMOXQ9NWM0 555 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 SNX11Q9Y5W9 270 aa13.78□□□□□ -0.2
BEST1-206ENST00000529265 CABIN1Q9Y6J0 2220 aa13.77□□□□□ -0.2
BEST1-206ENST00000529265 GPR179Q6PRD1 2367 aa13.77□□□□□ -0.2
BEST1-206ENST00000529265 ZFC3H1O60293 1989 aaKnown RBP13.77□□□□□ -0.21
BEST1-206ENST00000529265 TMEM202A6NGA9 273 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 CDK14O94921 469 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 ERVK-10P10266 1014 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 ACRV1P26436 265 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 ARNTP27540 789 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 TNFRSF8P28908 595 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 SSTR1P30872 391 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 CA5AP35218 305 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 POLD2P49005 469 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 ATXN3P54252 364 aaPredicted RBP13.77□□□□□ -0.21
BEST1-206ENST00000529265 VSNL1P62760 191 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 IRX4P78413 519 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 PPARDQ03181 441 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 TMEM115Q12893 351 aaPredicted RBP13.77□□□□□ -0.21
BEST1-206ENST00000529265 GRIK2Q13002 908 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 PLA2G2CQ5R387 149 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 TPRG1LQ5T0D9 272 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 STEAP4Q687X5 459 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 C3orf62Q6ZUJ4 267 aa13.77□□□□□ -0.21
BEST1-206ENST00000529265 MARK2Q7KZI7 788 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms