RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 GSK3BP49841 420 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 NR1H2P55055 460 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 LIPEQ05469 1076 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 SELPLGQ14242 412 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 TTC33Q6PID6 262 aaPredicted RBP7.4□□□□□ -1.22
C11orf54-207ENST00000528288 TBPL2Q6SJ96 375 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 IFNL1Q8IU54 200 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 CLVS1Q8IUQ0 354 aaPredicted RBP7.4□□□□□ -1.22
C11orf54-207ENST00000528288 CCDC117Q8IWD4 279 aaPredicted RBP7.4□□□□□ -1.22
C11orf54-207ENST00000528288 COLGALT2Q8IYK4 626 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 OR10Q1Q8NGQ4 319 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 ABTB1Q969K4 478 aaPredicted RBP7.4□□□□□ -1.22
C11orf54-207ENST00000528288 FUBP1Q96AE4 644 aaKnown RBP7.4□□□□□ -1.22
C11orf54-207ENST00000528288 EFHD1Q9BUP0 239 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 OSBPL11Q9BXB4 747 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 FBXO44Q9H4M3 255 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 SQORQ9Y6N5 450 aa7.4□□□□□ -1.22
C11orf54-207ENST00000528288 NLRC5Q86WI3 1866 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 TRPM7Q96QT4 1865 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 H3BNH8 94 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 FFAR3O14843 346 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 GPR42O15529 346 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 PAPSS2O95340 614 aaPredicted RBP7.4□□□□□ -1.23
C11orf54-207ENST00000528288 TYMPP19971 482 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 GKP32189 559 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 MC4RP32245 332 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 CA5AP35218 305 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 GDF5P43026 501 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 OR4D2P58180 307 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 CTBSQ01459 385 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.23
C11orf54-207ENST00000528288 TRIP4Q15650 581 aaPredicted RBP7.4□□□□□ -1.23
C11orf54-207ENST00000528288 NHSL2Q5HYW2 709 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 RTP2Q5QGT7 225 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 KANK2Q63ZY3 851 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 ANKRD34AQ69YU3 496 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 C8orf82Q6P1X6 216 aaPredicted RBP7.4□□□□□ -1.23
C11orf54-207ENST00000528288 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 SCML4Q8N228 414 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 TEX26Q8N6G2 289 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 FNDC5Q8NAU1 212 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 LINGO1Q96FE5 620 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 ZFRQ96KR1 1074 aaKnown RBP7.4□□□□□ -1.23
C11orf54-207ENST00000528288 PLEKHG4BQ96PX9 1271 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 TCF12Q99081 682 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 CINPQ9BW66 212 aaPredicted RBP7.4□□□□□ -1.23
C11orf54-207ENST00000528288 PTTG2Q9NZH5 202 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 SARDHQ9UL12 918 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 CDC14AQ9UNH5 594 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 Q9Y3F1 56 aa7.4□□□□□ -1.23
C11orf54-207ENST00000528288 WASH4PA8MWX3 477 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 F5H5T6 163 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SYNCRIPO60506 623 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TRMUO75648 421 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 VNN2O95498 520 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ALPIP09923 528 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 CDK4P11802 303 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 HOXD9P28356 352 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 IST1P53990 364 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 GNA12Q03113 381 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 RAD51Q06609 339 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TWF1Q12792 350 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 MFSD14CQ5VZR4 134 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ANKS6Q68DC2 871 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TMEM214Q6NUQ4 689 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 KIAA2013Q8IYS2 634 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 GABPB2Q8TAK5 448 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 STAG3L4Q8TBR4 150 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 UPF1Q92900 1129 aaKnown RBP eCLIP7.39□□□□□ -1.235e-11■■■■□ 20.6
C11orf54-207ENST00000528288 RNF145Q96MT1 663 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 KCTD14Q9BQ13 255 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 GPATCH1Q9BRR8 931 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 NAA50Q9GZZ1 169 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TLR8Q9NR97 1041 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TAS2R13Q9NYV9 303 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 DMTF1Q9Y222 760 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SCN10AQ9Y5Y9 1956 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 DOCK4Q8N1I0 1966 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ADAMTS4O75173 837 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 OAZ2O95190 189 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SNAP29O95721 258 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 C1RP00736 705 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 PRLP01236 227 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 CYBBP04839 570 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 FGF1P05230 155 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 PRKAR2AP13861 404 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 DNAJB1P25685 340 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 PSMA4P25789 261 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 HSPA13P48723 471 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 KCNK10P57789 538 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TRAP1Q12931 704 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 LCP2Q13094 533 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SLC44A4Q53GD3 710 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ATXN7L2Q5T6C5 722 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ADGRG5Q8IZF4 528 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 CLDN19Q8N6F1 224 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SNRNP27Q8WVK2 155 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 MTFMTQ96DP5 389 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ALG2Q9H553 416 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ZFYVE28Q9HCC9 887 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms