RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ARSDP51689 593 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 PPIDQ08752 370 aaKnown RBP22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 FAM182AQ5T1J6 154 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 ALS2CLQ60I27 953 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 ANKS6Q68DC2 871 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 OR8K1Q8NGG5 319 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 HERPUD2Q9BSE4 406 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 XPO4Q9C0E2 1151 aaKnown RBP22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 KLHL3Q9UH77 587 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 NENFQ9UMX5 172 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 SHOC2Q9UQ13 582 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 FLNBO75369 2602 aaKnown RBP22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 B4E171 279 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 SLC4A1P02730 911 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 HNRNPH3P31942 346 aaKnown RBP22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 MAN1A1P33908 653 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 TSPAN7P41732 249 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 RAB15P59190 212 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZBTB17Q13105 803 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 CCDC70Q6NSX1 233 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 WDR74Q6RFH5 385 aaPredicted RBP22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 NT5DC3Q86UY8 548 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 PHYKPLQ8IUZ5 450 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 CNTD1Q8N815 330 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 SLC35G2Q8TBE7 412 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 HTR3CQ8WXA8 447 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 AGAP3Q96P47 875 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 CTRCQ99895 268 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 CEP41Q9BYV8 373 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 OR2AG1Q9H205 316 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 CARD9Q9H257 536 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 OSGEPL1Q9H4B0 414 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 CLMPQ9H6B4 373 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 ATXN10Q9UBB4 475 aa22.14■■□□□ 1.13
TRAPPC4-208ENST00000527680 OR5K4A6NMS3 321 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 APOL1O14791 398 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 NUAK1O60285 661 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 TMEM253P0C7T8 217 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 PIRTP0C851 137 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 F3P13726 295 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 IFI35P80217 286 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 NFKB2Q00653 900 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 PDK1Q15118 436 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 PCSK7Q16549 785 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZNF648Q5T619 568 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 GPR63Q9BZJ6 419 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 TRIM39Q9HCM9 518 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 PRDM8Q9NQV8 689 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 KLC4Q9NSK0 619 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 PDP2Q9P2J9 529 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 CPNE7Q9UBL6 633 aa22.13■■□□□ 1.13
TRAPPC4-208ENST00000527680 KIR2DS5A0A0G2JLQ3 304 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 A0A0G2JNG1 304 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 KIR2DS3K7RE56 304 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 RAD1O60671 282 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 WISP1O95388 367 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 TNNT1P13805 278 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 LIFP15018 202 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZNF8P17098 575 aaPredicted RBP22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 NOP2P46087 812 aaKnown RBP22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 KIR2DS5Q14953 304 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZNF569Q5MCW4 686 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 RFX6Q8HWS3 928 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 PLD5Q8N7P1 536 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 TEFMQ96QE5 360 aaKnown RBP22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 SLC12A9Q9BXP2 914 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 RAD18Q9NS91 495 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 STARD5Q9NSY2 213 aa22.12■■□□□ 1.13
TRAPPC4-208ENST00000527680 TPM1P09493 284 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZFXP17010 805 aaPredicted RBP22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 ITGB6P18564 788 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 EPHA4P54764 986 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 MC2RQ01718 297 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 BORAQ6PGQ7 559 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 CEACAM20Q6UY09 585 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 ATG14Q6ZNE5 492 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 ARHGAP22Q7Z5H3 698 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 AVL9Q8NBF6 648 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 GPR26Q8NDV2 337 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 KIAA1143Q96AT1 154 aaPredicted RBP22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 RNF25Q96BH1 459 aaPredicted RBP22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 EID2BQ96D98 161 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 IMP4Q96G21 291 aaKnown RBP22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 ANP32EQ9BTT0 268 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZSCAN5AQ9BUG6 496 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 TBC1D10AQ9BXI6 508 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 TRIM4Q9C037 500 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 MAGEE1Q9HCI5 957 aa22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 SETXQ7Z333 2677 aaKnown RBP22.11■■□□□ 1.13
TRAPPC4-208ENST00000527680 PPP1R12AO14974 1030 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 PPFIA2O75334 1257 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 MTA2O94776 668 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 KRT1P04264 644 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 ARHGAP25P42331 645 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 DYNLT1P63172 113 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 CDK18Q07002 472 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 CLCA4Q14CN2 919 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 INSCQ1MX18 579 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms