RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 LRRC40Q9H9A6 602 aa20.93■□□□□ 0.94
PKP3-205ENST00000527442 FAM153AQ9UHL3 310 aa20.93■□□□□ 0.94
PKP3-205ENST00000527442 ANAPC5Q9UJX4 755 aa20.93■□□□□ 0.94
PKP3-205ENST00000527442 PNMA8BQ9ULN7 279 aaPredicted RBP20.93■□□□□ 0.94
PKP3-205ENST00000527442 ITM2BQ9Y287 266 aa20.93■□□□□ 0.94
PKP3-205ENST00000527442 UBR5O95071 2799 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 PTPN13Q12923 2485 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 CCDC187A0A096LP49 1063 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 TCRBV7S3A2A0A539 114 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 F5H423 210 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 MT-CYBP00156 380 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 CD86P42081 329 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 MLLT3P42568 568 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 PFN3P60673 137 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 IHHQ14623 411 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 ATXN7L2Q5T6C5 722 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 SRLQ86TD4 932 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 EXD3Q8N9H8 876 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 MCUQ8NE86 351 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 FBXO25Q8TCJ0 367 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 CCNL2Q96S94 520 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 RBM15Q96T37 977 aaKnown RBP eCLIP20.92■□□□□ 0.945e-6■■□□□ 11.5
PKP3-205ENST00000527442 CCDC3Q9BQI4 270 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 PARD6BQ9BYG5 372 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 FRMD8Q9BZ67 464 aaPredicted RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 SYNDIG1Q9H7V2 258 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 SPASTQ9UBP0 616 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 APOBEC3BQ9UH17 382 aaKnown RBP20.92■□□□□ 0.94
PKP3-205ENST00000527442 LRP4O75096 1905 aa20.92■□□□□ 0.94
PKP3-205ENST00000527442 BOD1L1Q8NFC6 3051 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 EFSO43281 561 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 SCNN1BP51168 640 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 PLTPP55058 493 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 NFATC3Q12968 1075 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 SGCGQ13326 291 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 HLTFQ14527 1009 aaKnown RBP eCLIP20.91■□□□□ 0.94
PKP3-205ENST00000527442 CARD16Q5EG05 197 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 PRRT3Q5FWE3 981 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 C6orf132Q5T0Z8 1188 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 PPP1R21Q6ZMI0 780 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 PHACTR4Q8IZ21 702 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 BTN2A2Q8WVV5 523 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 NAT6Q93015 286 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 LRRC61Q9BV99 259 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 FOXP3Q9BZS1 431 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 TRIM4Q9C037 500 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 PHACTR1Q9C0D0 580 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 ZDHHC6Q9H6R6 413 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 NOD2Q9HC29 1040 aa20.91■□□□□ 0.94
PKP3-205ENST00000527442 ATXN7L1Q9ULK2 861 aaPredicted RBP20.91■□□□□ 0.94
PKP3-205ENST00000527442 UQCRHLA0A096LP55 91 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.9■□□□□ 0.94
PKP3-205ENST00000527442 UQCRHP07919 91 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 ITGA2BP08514 1039 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 ADRA1AP35348 466 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 IGFALSP35858 605 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 RPIAP49247 311 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 LMAN1P49257 510 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 CBLBQ13191 982 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 SPIDRQ14159 915 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 ZNF534Q76KX8 674 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 DENND6BQ8NEG7 585 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 OR6K2Q8NGY2 324 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 IFT81Q8WYA0 676 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 GLMNQ92990 594 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 VOPP1Q96AW1 172 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 MRGPRX2Q96LB1 330 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 NSMCE3Q96MG7 304 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 TUBGCP5Q96RT8 1024 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 WDR70Q9NW82 654 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 UBP1Q9NZI7 540 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 NFU1Q9UMS0 254 aa20.9■□□□□ 0.94
PKP3-205ENST00000527442 LRRK1Q38SD2 2015 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 TTC24A2A3L6 582 aaPredicted RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 LMO7DNF2Z398 122 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 TSPAN6O43657 245 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 SOCS5O75159 536 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 MYBL2P10244 700 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 MLNP12872 115 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 GKP32189 559 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 THOP1P52888 689 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 WNT3AP56704 352 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 SARNPP82979 210 aaKnown RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 GRM3Q14832 879 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 LINC00303Q3SY05 128 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 B3GNT8Q7Z7M8 397 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 LINC00523Q86TU6 105 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.89■□□□□ 0.93
PKP3-205ENST00000527442 IPMKQ8NFU5 416 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 WDR48Q8TAF3 677 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 ASB12Q8WXK4 309 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 LIN37Q96GY3 246 aaPredicted RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 FMO2Q99518 471 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 TDRD1Q9BXT4 1180 aaKnown RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 CPEB1Q9BZB8 566 aaKnown RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 CLPBQ9H078 707 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 XAB2Q9HCS7 855 aaKnown RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 MTRF1LQ9UGC7 380 aaKnown RBP20.89■□□□□ 0.93
PKP3-205ENST00000527442 PADI4Q9UM07 663 aa20.89■□□□□ 0.93
PKP3-205ENST00000527442 C16orf96A6NNT2 1141 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms