RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MYLK2Q9H1R3 596 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TMEM245Q9H330 911 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RNPEPQ9H4A4 650 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EBF3Q9H4W6 596 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 Q9H521 79 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 MROH8Q9H579 483 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PIF1Q9H611 641 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 NARFLQ9H6Q4 476 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 UNKLQ9H9P5 680 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PPCSQ9HAB8 311 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CRLF2Q9HC73 371 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 IL1RAPL2Q9NP60 686 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 GIMAP4Q9NUV9 329 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PARVAQ9NVD7 372 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 GDAP2Q9NXN4 497 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 NDE1Q9NXR1 346 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CPNE7Q9UBL6 633 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PRSS50Q9UI38 385 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 BAG5Q9UL15 447 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 GUCA1BQ9UMX6 200 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EIF3LQ9Y262 564 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CAB39Q9Y376 341 aaPredicted RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RIPK3Q9Y572 518 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PCDHGA2Q9Y5H1 932 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ENTPD2Q9Y5L3 495 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 MAGED1Q9Y5V3 778 aaPredicted RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CYP46A1Q9Y6A2 500 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EID1Q9Y6B2 187 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ARHGEF28Q8N1W1 1705 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 MROH5Q6ZUA9 1318 aa3.71□□□□□ -1.81
CLNS1A-209ENST00000527299 AGLP35573 1532 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 A0A087WWV3 80 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 A0A1B0GTQ1 180 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CCDC78A2IDD5 438 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZSCAN5CA6NGD5 496 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 MANSC4A6NHS7 340 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 LRRC53A6NM62 1247 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TARM1B6A8C7 271 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TXNDC9O14530 226 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TOR1BO14657 336 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TNPO2O14787 897 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC22A2O15244 555 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TP73O15350 636 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 POLR2DO15514 142 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC7A4O43246 635 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 MAGEC1O60732 1142 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 NOS1APO75052 506 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 OR7A10O76100 309 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PGM3O95394 542 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 VNN1O95497 513 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SNAP29O95721 258 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 APOC1P02654 83 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 IL6P05231 212 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SNRPA1P09661 255 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 JMJD7P0C870 316 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 T-ENOLP0DO92 83 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CKBP12277 381 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CCDC130P13994 396 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 HOXB8P17481 243 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ALOX12P18054 663 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 FGFR4P22455 802 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CTNNA2P26232 953 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ITPKBP27987 946 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ACSL1P33121 698 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CRHR1P34998 444 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SERPINB5P36952 375 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 IL6STP40189 918 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 IARSP41252 1262 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 STAT1P42224 750 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 NAMPTP43490 491 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 POU3F4P49335 361 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 HOXA1P49639 335 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC5A3P53794 718 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 AIF1P55008 147 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TPTEP56180 551 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PSMC5P62195 406 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 UBE2IP63279 158 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CCNA1P78396 465 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 POU6F2P78424 691 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 RIPPLY1Q0D2K3 151 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 DLG1Q12959 904 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 IFIT5Q13325 482 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PLD1Q13393 1074 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 NAB1Q13506 487 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TFDP1Q14186 410 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CDK10Q15131 360 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SGCAQ16586 387 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 MAPK6Q16659 721 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PTPN21Q16825 1174 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 UGP2Q16851 508 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PFKFB3Q16875 520 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 LRRC36Q1X8D7 754 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TRMT5Q32P41 509 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 AARDQ4LEZ3 155 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ESCO2Q56NI9 601 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 DALRD3Q5D0E6 543 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 RBM20Q5T481 1227 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 GPR158Q5T848 1215 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ATAD3BQ5T9A4 648 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms