RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SYT13Q7L8C5 426 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 C10orf107Q8IVU9 208 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 C10orf67Q8IYJ2 551 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 HDDC3Q8N4P3 179 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 PBXIP1Q96AQ6 731 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 CDKN2AIPNLQ96HQ2 116 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 ZNF395Q9H8N7 513 aaPredicted RBP18.67■□□□□ 0.58
SMPD1-203ENST00000527275 NUMA1Q14980 2115 aa18.67■□□□□ 0.58
SMPD1-203ENST00000527275 TCRBV21S2A2A0A5A6 115 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CHURC1-FNTBB4DL54 471 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 FGF3P11487 239 aaPredicted RBP18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CYP2A6P11509 494 aaPredicted RBP18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CPA3P15088 417 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 STMN1P16949 149 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 VIPR1P32241 457 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 PGGT1BP53609 377 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 RAB10P61026 200 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CCDC15Q0P6D6 951 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 RALGDSQ12967 914 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 SETDB1Q15047 1291 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CNSTQ6PJW8 725 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.66■□□□□ 0.58
SMPD1-203ENST00000527275 GPATCH11Q8N954 259 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 PJA1Q8NG27 643 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 SIPA1Q96FS4 1042 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 ELMO2Q96JJ3 720 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 NMRAL1Q9HBL8 299 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 THAP1Q9NVV9 213 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 TTC28Q96AY4 2481 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 A0A0G2JND7 137 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 OR51F1A6NGY5 319 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 RNASEH2AO75792 299 aaKnown RBP18.66■□□□□ 0.58
SMPD1-203ENST00000527275 RPP40O75818 363 aaKnown RBP18.66■□□□□ 0.58
SMPD1-203ENST00000527275 DCTN3O75935 186 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 DNTTP04053 509 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 SLC35E2BP0CK96 405 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 NDUFV2P19404 249 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 MAGEA9P43362 315 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 AGBL4Q5VU57 503 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 DPPA4Q7L190 304 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CILP2Q8IUL8 1156 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CEP97Q8IW35 865 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 LMNTD2Q8IXW0 634 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 TSNARE1Q96NA8 513 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 LRRC37BQ96QE4 947 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 OMDQ99983 421 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 C1QTNF1Q9BXJ1 281 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 C20orf27Q9GZN8 174 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 FBXL12Q9NXK8 326 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 SLC12A4Q9UP95 1085 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 ACOT9Q9Y305 439 aa18.66■□□□□ 0.58
SMPD1-203ENST00000527275 CCDC162PA2VCL2 907 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 NEMP1O14524 444 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 COL6A2P12110 1019 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 ZNF30P17039 623 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 PSMA3P25788 255 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 CRABP2P29373 138 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 ARFIP2P53365 341 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 POU4F1Q01851 419 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 ELP6Q0PNE2 266 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 ZNF789Q5FWF6 425 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 TJAP1Q5JTD0 557 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 RFLNAQ6ZTI6 216 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 CRLF3Q8IUI8 442 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 WRAP53Q9BUR4 548 aaKnown RBP18.65■□□□□ 0.58
SMPD1-203ENST00000527275 KCNK13Q9HB14 408 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 FKBPLQ9UIM3 349 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 RUVBL2Q9Y230 463 aaKnown RBP18.65■□□□□ 0.58
SMPD1-203ENST00000527275 CAPN7Q9Y6W3 813 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 ATG13O75143 517 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 C1SP09871 688 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 BPIP17213 487 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 GABRG2P18507 467 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 SUOXP51687 545 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 DGKEP52429 567 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 SLC12A2P55011 1212 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 TAS2R38P59533 333 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 TAS2R39P59534 338 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 LIPIQ6XZB0 460 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 HSD11B1LQ7Z5J1 315 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 GALNT7Q86SF2 657 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 LCA5Q86VQ0 697 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMPD1-203ENST00000527275 PNPLA1Q8N8W4 532 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 GANCQ8TET4 914 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 HMGB4Q8WW32 186 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 RAB7BQ96AH8 199 aa18.65■□□□□ 0.58
SMPD1-203ENST00000527275 GOT2P00505 430 aaKnown RBP18.64■□□□□ 0.57
SMPD1-203ENST00000527275 SERPINE1P05121 402 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 ELFN1P0C7U0 828 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 C7P10643 843 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 STC1P52823 247 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 ZBTB16Q05516 673 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 BNIP1Q12981 228 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 CCDC91Q7Z6B0 441 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 CLDN23Q96B33 292 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 MYLK2Q9H1R3 596 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 SIT1Q9Y3P8 196 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 FADS3Q9Y5Q0 445 aa18.64■□□□□ 0.57
SMPD1-203ENST00000527275 G3V2L1 256 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms