RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GLOD4Q9HC38 313 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 VPS4AQ9UN37 437 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ZFR2Q9UPR6 939 aaKnown RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PCDHGC4Q9Y5F7 938 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TNRC6AQ8NDV7 1962 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF891A8MT65 544 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 KRIT1O00522 736 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 CAPN5O15484 640 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 KCNN4O15554 427 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 SEMA7AO75326 666 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 METTL18O95568 372 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 IGSF6O95976 241 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 RPLP0P05388 317 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 ANXA6P08133 673 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 ZSCAN5DPP0CG00 497 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 NFKB1P19838 968 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 MSNP26038 577 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 CASQ1P31415 396 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 DEKP35659 375 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 HSPA9P38646 679 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 RECQLP46063 649 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 MLLT10P55197 1068 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 CCL7P80098 99 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 MSLNQ13421 630 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 FGL2Q14314 439 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF805Q5CZA5 627 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 DARS2Q6PI48 645 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 GDPD4Q6W3E5 623 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 PARS2Q7L3T8 475 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 ARL10Q8N8L6 244 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 FAM71DQ8N9W8 422 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 OR6C4Q8NGE1 309 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 SPATA22Q8NHS9 363 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 CCDC110Q8TBZ0 833 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 PIH1D2Q8WWB5 315 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 CCDC74AQ96AQ1 378 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 OXNAD1Q96HP4 312 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 KLHL32Q96NJ5 620 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 FCRL5Q96RD9 977 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 TUBGCP5Q96RT8 1024 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 LRRC61Q9BV99 259 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 FRMD8P1Q9BZ68 369 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 SLC25A51Q9H1U9 297 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 ZDHHC6Q9H6R6 413 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 DKK3Q9UBP4 350 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 APOBEC3BQ9UH17 382 aaKnown RBP10.89□□□□□ -0.67
NEDD8-204ENST00000526430 SVILO95425 2214 aa10.89□□□□□ -0.67
NEDD8-204ENST00000526430 C16orf96A6NNT2 1141 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PGRMC1O00264 195 aaKnown RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 AREL1O15033 823 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 MT-CYBP00156 380 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PRNPP04156 253 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 UGT2B4P06133 528 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 LIFP15018 202 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 GNLYP22749 145 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 COL8A1P27658 744 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 STIP1P31948 543 aaKnown RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 COILP38432 576 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 ABL2P42684 1182 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PTGIRP43119 386 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 MAPK10P53779 464 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 AP1S1P61966 158 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 EIF2B5Q13144 721 aaKnown RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PDE1CQ14123 709 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF235Q14590 738 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PRRT3Q5FWE3 981 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 CCDC181Q5TID7 509 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 C1QL3Q5VWW1 255 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 SEL1L3Q68CR1 1132 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 KCTD11Q693B1 232 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 KIAA1161Q6NSJ0 714 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 LVRNQ6Q4G3 990 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 HEATR4Q86WZ0 1026 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 CDKL3Q8IVW4 592 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 CBARPQ8N350 705 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 SDR16C5Q8N3Y7 309 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 HCAR2Q8TDS4 363 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 APOBEC4Q8WW27 367 aaKnown RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 MOCOSQ96EN8 888 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 SLC45A3Q96JT2 553 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 CAPZA3Q96KX2 299 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF641Q96N77 438 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 VAT1Q99536 393 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 HDAC8Q9BY41 377 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 SLC17A9Q9BYT1 436 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 POLR1EQ9GZS1 481 aaKnown RBP10.88□□□□□ -0.67
NEDD8-204ENST00000526430 LRRN3Q9H3W5 708 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 GGT7Q9UJ14 662 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 PPIL1Q9Y3C6 166 aa10.88□□□□□ -0.67
NEDD8-204ENST00000526430 DIDO1Q9BTC0 2240 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 A0A0U1RQS6 177 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 LOC285095A0A1B0GVY8 99 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 WIPF3A6NGB9 483 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 KPNA3O00505 521 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms