RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 ATP6V1B1P15313 513 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 ATP6V1B2P21281 511 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 RPS24P62847 133 aaKnown RBP21.09■□□□□ 0.97
VPS28-205ENST00000526204 ZNF177Q13360 481 aaPredicted RBP21.09■□□□□ 0.97
VPS28-205ENST00000526204 PITRM1Q5JRX3 1037 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 PPP4R4Q6NUP7 873 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 KLHDC10Q6PID8 442 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 RBM44Q6ZP01 1051 aaKnown RBP21.09■□□□□ 0.97
VPS28-205ENST00000526204 CARM1Q86X55 608 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 PACRGLQ8N7B6 248 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 OVCA2Q8WZ82 227 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 MUC13Q9H3R2 512 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 PTTG2Q9NZH5 202 aa21.09■□□□□ 0.97
VPS28-205ENST00000526204 TRMT6Q9UJA5 497 aaKnown RBP21.09■□□□□ 0.97
VPS28-205ENST00000526204 A0A1W2PP18 115 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 TYW5A2RUC4 315 aaKnown RBP21.08■□□□□ 0.97
VPS28-205ENST00000526204 FXYD1O00168 92 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 ENPP3O14638 875 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 GIPC1O14908 333 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 RHOCP08134 193 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 ETS2P15036 469 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 ATF6P18850 670 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 IL10P22301 178 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 SLC6A2P23975 617 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 CLCN4P51793 760 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 IL2P60568 153 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 LCN8Q6JVE9 175 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 CHST9Q7L1S5 443 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 PLD4Q96BZ4 506 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 LRCH3Q96II8 777 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 ZNF512Q96ME7 567 aaPredicted RBP21.08■□□□□ 0.97
VPS28-205ENST00000526204 NSMCE3Q96MG7 304 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 TTPALQ9BTX7 342 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 SLC52A3Q9NQ40 469 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 IKZF3Q9UKT9 509 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 COMMD10Q9Y6G5 202 aa21.08■□□□□ 0.97
VPS28-205ENST00000526204 VILLO15195 856 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 TIPRLO75663 272 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 KCNK10P57789 538 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 CYTH1Q15438 398 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 AARS2Q5JTZ9 985 aaKnown RBP21.08■□□□□ 0.96
VPS28-205ENST00000526204 BORAQ6PGQ7 559 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 DENND1CQ8IV53 801 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 METTL25Q8N6Q8 603 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 LPCAT1Q8NF37 534 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 OR56A4Q8NGH8 313 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 EXOC2Q96KP1 924 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 SLC29A1Q99808 456 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 GRIP2Q9C0E4 1043 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 TMEM45AQ9NWC5 275 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 PCTPQ9UKL6 214 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 DMTF1Q9Y222 760 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 RNF11Q9Y3C5 154 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 RAI2Q9Y5P3 530 aa21.08■□□□□ 0.96
VPS28-205ENST00000526204 A0A1B0GTL3 188 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 DHRS12A0PJE2 317 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 ARHGAP10A1A4S6 786 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 NPEPPSL1A6NEC2 478 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 ANKRD66B4E2M5 251 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 ALDH1A1P00352 501 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 PSMA4P25789 261 aaKnown RBP21.07■□□□□ 0.96
VPS28-205ENST00000526204 RCAN2Q14206 197 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.07■□□□□ 0.96
VPS28-205ENST00000526204 HECTD3Q5T447 861 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 AP1ARQ63HQ0 302 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 LRRC8DQ7L1W4 858 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 KCNJ9Q92806 393 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 SLC45A3Q96JT2 553 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 TMEM79Q9BSE2 394 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 TSEN34Q9BSV6 310 aaKnown RBP21.07■□□□□ 0.96
VPS28-205ENST00000526204 HGH1Q9BTY7 390 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 AIG1Q9NVV5 245 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 CMTM6Q9NX76 183 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 A0A1B0GVM2 712 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 SNX2O60749 519 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 MC4RP32245 332 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 ADARP55265 1226 aaKnown RBP21.07■□□□□ 0.96
VPS28-205ENST00000526204 PRKCQQ04759 706 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 XKR7Q5GH72 579 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 TBCELQ5QJ74 424 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 INTS11Q5TA45 600 aaKnown RBP21.07■□□□□ 0.96
VPS28-205ENST00000526204 SYVN1Q86TM6 617 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 GPSM1Q86YR5 675 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 ALDH16A1Q8IZ83 802 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 SLC43A3Q8NBI5 491 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 NMD3Q96D46 503 aaKnown RBP21.07■□□□□ 0.96
VPS28-205ENST00000526204 ANKRD60Q9BZ19 345 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 RBM38Q9H0Z9 239 aaKnown RBP21.07■□□□□ 0.96
VPS28-205ENST00000526204 PNPLA3Q9NST1 481 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 THEGQ9P2T0 379 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 TIMM22Q9Y584 194 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 PCDHA9Q9Y5H5 950 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 AK5Q9Y6K8 562 aa21.07■□□□□ 0.96
VPS28-205ENST00000526204 CBX4O00257 560 aa21.06■□□□□ 0.96
VPS28-205ENST00000526204 HTRA2O43464 458 aaPredicted RBP21.06■□□□□ 0.96
VPS28-205ENST00000526204 H6PDO95479 791 aa21.06■□□□□ 0.96
VPS28-205ENST00000526204 TSPAN12O95859 305 aa21.06■□□□□ 0.96
VPS28-205ENST00000526204 F11P03951 625 aa21.06■□□□□ 0.96
VPS28-205ENST00000526204 SELPP16109 830 aa21.06■□□□□ 0.96
VPS28-205ENST00000526204 TUFMP49411 452 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms