RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 TRIM39Q9HCM9 518 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 VPS18Q9P253 973 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 APPL1Q9UKG1 709 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 TMPRSS11EQ9UL52 423 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 ARHGEF17Q96PE2 2063 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 PPM1DO15297 605 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 ARHGAP6O43182 974 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 B4GAT1O43505 415 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 NUAK1O60285 661 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A9O60656 530 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 SNX2O60749 519 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A6P19224 532 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A1P22309 533 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A4P22310 534 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 ALDH4A1P30038 563 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 CA5AP35218 305 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A3P35503 534 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A5P35504 534 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 HMGCLP35914 325 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 LSSP48449 732 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 B4GALNT1Q00973 533 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 KLF1Q13351 362 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 PLA2G4EQ3MJ16 856 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 AMZ1Q400G9 498 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 ATP13A5Q4VNC0 1218 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 KHDC1Q4VXA5 237 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 USP53Q70EK8 1073 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 GLT6D1Q7Z4J2 308 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 C17orf82Q86X59 251 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 LRRC8AQ8IWT6 810 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 TTC13Q8NBP0 860 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 CARD9Q9H257 536 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 TRABDQ9H4I3 376 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 IL26Q9NPH9 171 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 LZTFL1Q9NQ48 299 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 IL17CQ9P0M4 197 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 NFKBIL1Q9UBC1 381 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 KNTC1P50748 2209 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 ASPMQ8IZT6 3477 aa12.71□□□□□ -0.37
TRAPPC4-205ENST00000525079 CACNA1BQ00975 2339 aa12.71□□□□□ -0.38
TRAPPC4-205ENST00000525079 D6RAR5 112 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 GPR39O43194 453 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 PNLIPP16233 465 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ITPKBP27987 946 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ADRA1AP35348 466 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ACTN2P35609 894 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 SPAM1P38567 509 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 INHBCP55103 352 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 GDF10P55107 478 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 PEX6Q13608 980 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 LRP8Q14114 963 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 CHRNA6Q15825 494 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 COL28A1Q2UY09 1125 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 TBC1D25Q3MII6 688 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 NKAIN2Q5VXU1 208 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 FAM151BQ6UXP7 276 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 RANBP10Q6VN20 620 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMPRSS9Q7Z410 1059 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF761Q86XN6 746 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 PHYKPLQ8IUZ5 450 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 GDAP1Q8TB36 358 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ATG4AQ8WYN0 398 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 FGF11Q92914 225 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 NAF1Q96HR8 494 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMEM121Q9BTD3 319 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 RMI1Q9H9A7 625 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 RDH14Q9HBH5 336 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 HACD3Q9P035 362 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 TBC1D29Q9UFV1 150 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC23A2Q9UGH3 650 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 AAR2Q9Y312 384 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 KCTD3Q9Y597 815 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ARL5AQ9Y689 179 aa12.7□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZFC3H1O60293 1989 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCDC187A0A096LP49 1063 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 C5orf60A6NFR6 353 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 STX7O15400 261 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CDK14O94921 469 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 METTL18O95568 372 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCDC175P0C221 793 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 HGFP14210 728 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 EIF2S3P41091 472 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCZ1BP86790 482 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCZ1P86791 482 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCDC173Q0VFZ6 552 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 SEL1L2Q5TEA6 688 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 PDPK2PQ6A1A2 396 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 ARHGEF18Q6ZSZ5 1173 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 WDR36Q8NI36 951 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC35B2Q8TB61 432 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC37A2Q8TED4 501 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms