RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 VPS35Q96QK1 796 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 FERMT1Q9BQL6 677 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 SYNDIG1Q9H7V2 258 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 TRIM39Q9HCM9 518 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 IL26Q9NPH9 171 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 HACD3Q9P035 362 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 IL17CQ9P0M4 197 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 TMPRSS11EQ9UL52 423 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
CTSB-207ENST00000524654 ANKRD11Q6UB99 2663 aaPredicted RBP10.87□□□□□ -0.67
CTSB-207ENST00000524654 COL27A1Q8IZC6 1860 aaPredicted RBP10.87□□□□□ -0.67
CTSB-207ENST00000524654 SHROOM3Q8TF72 1996 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 CCDC187A0A096LP49 1063 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 A6NCN8 305 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 RHPN2P1A8MT19 583 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 GOLGA6L6A8MZA4 724 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 TMX2-CTNND1H3BSU7 103 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 CHUKO15111 745 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 PPM1DO15297 605 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 GRID2O43424 1007 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 ZNF189O75820 626 aaPredicted RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 ANXA9O76027 345 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 EML2O95834 649 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 AGTP01019 485 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 ADRA1AP35348 466 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 TNNT3P45378 269 aaPredicted RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 GPR3P46089 330 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 FASLGP48023 281 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 GEMP55040 296 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 INHBCP55103 352 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 COL28A1Q2UY09 1125 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 ZNF648Q5T619 568 aaPredicted RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 ZDHHC20Q5W0Z9 365 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 DARS2Q6PI48 645 aaKnown RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 TMPRSS9Q7Z410 1059 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 ADGRG6Q86SQ4 1221 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 PHYKPLQ8IUZ5 450 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 SLITRK4Q8IW52 837 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 KLHDC8BQ8IXV7 354 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 SFRP1Q8N474 314 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 CCDC110Q8TBZ0 833 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 SPATA13Q96N96 652 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 FSD1LQ9BXM9 530 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 FOXP3Q9BZS1 431 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 OR2AG1Q9H205 316 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 BPIFA1Q9NP55 256 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 ARFGAP3Q9NP61 516 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 TBC1D29Q9UFV1 150 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 RALYQ9UKM9 306 aaKnown RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 ATXN7L1Q9ULK2 861 aaPredicted RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
CTSB-207ENST00000524654 AAR2Q9Y312 384 aaKnown RBP10.86□□□□□ -0.67
CTSB-207ENST00000524654 NBEAQ8NFP9 2946 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 TCRBV7S2A1N4TA0A589 114 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 GOLGA6L9A6NEM1 432 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 C5orf60A6NFR6 353 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 PRR19A6NJB7 356 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 CDRT15L2A8MXV6 281 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 GAPDHSO14556 408 aaPredicted RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 RRP8O43159 456 aaKnown RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 ARHGAP6O43182 974 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 KRT86O43790 486 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 VEGFDO43915 354 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 PPFIA2O75334 1257 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 STK10O94804 968 aaKnown RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 CPNE6O95741 557 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 ACP5P13686 325 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 ITPKBP27987 946 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 PSMB4P28070 264 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 CD1CP29017 333 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 ALDH4A1P30038 563 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 CLCNKAP51800 687 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 OR1D5P58170 312 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 EIF3IQ13347 325 aaKnown RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 SQSTM1Q13501 440 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 CLPPQ16740 277 aaPredicted RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 ATP13A5Q4VNC0 1218 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 KHDC1Q4VXA5 237 aaKnown RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 IYDQ6PHW0 289 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 GLT6D1Q7Z4J2 308 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 ZNF547Q8IVP9 402 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 SLC35B2Q8TB61 432 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 BLOC1S5Q8TDH9 187 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 SLC37A2Q8TED4 501 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 UBE2Q2Q8WVN8 375 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 TMEM74Q96NL1 305 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 FICDQ9BVA6 458 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 TSGA10Q9BZW7 698 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 STRADBQ9C0K7 418 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 EPB41L5Q9HCM4 733 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 THSD1Q9NS62 852 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTSB-207ENST00000524654 KCNK6Q9Y257 313 aa10.85□□□□□ -0.67
CTSB-207ENST00000524654 R3HDM2Q9Y2K5 976 aaKnown RBP10.85□□□□□ -0.67
CTSB-207ENST00000524654 IGHV1OR21-1A0A087WYE8 117 aa10.84□□□□□ -0.67
CTSB-207ENST00000524654 PLD2O14939 933 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms