RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ASB12Q8WXK4 309 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 LPGAT1Q92604 370 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 ARL8AQ96BM9 186 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 AP2M1Q96CW1 435 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 HHIPQ96QV1 700 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 C1QTNF7Q9BXJ2 289 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 BTBD1Q9H0C5 482 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 ABCG8Q9H221 673 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 FAM53CQ9NYF3 392 aa12.97□□□□□ -0.33
CPNE3-205ENST00000522240 FNDC3AQ9Y2H6 1198 aaKnown RBP12.97□□□□□ -0.33
CPNE3-205ENST00000522240 PLXND1Q9Y4D7 1925 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 IGLV3-16A0A075B6K0 115 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 HMX2A2RU54 273 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 C10orf142B7Z368 130 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 H3BQF6 201 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 ZNF217O75362 1048 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 NDUFS3O75489 264 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 PRSS56P0CW18 603 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 RPS3P23396 243 aaKnown RBP eCLIP12.96□□□□□ -0.33
CPNE3-205ENST00000522240 TEAD1P28347 426 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 OXTRP30559 389 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 PTGER3P43115 390 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 SERPINB8P50452 374 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 CCR3P51677 355 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 BMPR2Q13873 1038 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 ATP13A5Q4VNC0 1218 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 ANO7Q6IWH7 933 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 FAM45BPQ6NSW5 357 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 CNSTQ6PJW8 725 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 TAS2R42Q7RTR8 314 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 SERPINA9Q86WD7 417 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 TRIM69Q86WT6 500 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 HORMAD1Q86X24 394 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 PGBD3Q8N328 593 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 DDHD1Q8NEL9 900 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 OR2T34Q8NGX1 318 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 FAM45AQ8TCE6 357 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 ACMSDQ8TDX5 336 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 HEXDCQ8WVB3 486 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 SCAMP4Q969E2 229 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 RIOK2Q9BVS4 552 aaKnown RBP12.96□□□□□ -0.33
CPNE3-205ENST00000522240 C1QTNF2Q9BXJ5 285 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 C2orf42Q9NWW7 574 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 ZDHHC3Q9NYG2 299 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 DLGAP2Q9P1A6 1054 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 CD84Q9UIB8 345 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 ZFR2Q9UPR6 939 aaKnown RBP12.96□□□□□ -0.33
CPNE3-205ENST00000522240 COQ6Q9Y2Z9 468 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 PCDHB1Q9Y5F3 818 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.33
CPNE3-205ENST00000522240 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 FAM95CA0A1B0GW59 222 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 IGLON5A6NGN9 336 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 PRMT5O14744 637 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 GPR39O43194 453 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 HAUS5O94927 633 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 SOD1P00441 154 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 ZNF7P17097 686 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 AOC1P19801 751 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 CCNFP41002 786 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 MAGEA12P43365 314 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 CDKN1CP49918 316 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 POU4F1Q01851 419 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 MTAPQ13126 283 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 SETMARQ53H47 684 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 LDLRAP1Q5SW96 308 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 MROH9Q5TGP6 573 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 CCDC91Q7Z6B0 441 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 LDB1Q86U70 411 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 PHYKPLQ8IUZ5 450 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 DENND6BQ8NEG7 585 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 ALKBH8Q96BT7 664 aaKnown RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 CABS1Q96KC9 395 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 COPS8Q99627 209 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 AARSD1Q9BTE6 412 aaKnown RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 P2RY12Q9H244 342 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 MKS1Q9NXB0 559 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
CPNE3-205ENST00000522240 NOVA2Q9UNW9 492 aaKnown RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 MTO1Q9Y2Z2 717 aaKnown RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
CPNE3-205ENST00000522240 USP34Q70CQ2 3546 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3EA0A087X179 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 FADS2P1A8MWK0 482 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CFAP99D6REC4 459 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms