RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	PCYT2	Q99447	389 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	NEURL2	Q9BR09	285 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	TRMT61B	Q9BVS5	477 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	POLR1B	Q9H9Y6	1135 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	HCFC1R1	Q9NWW0	138 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	CLIC4	Q9Y696	253 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115		A0A087X0M5	115 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115		A0A1B0GX30	115 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	MAP2K7	O14733	419 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	CAPN9	O14815	690 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	ZNHIT1	O43257	154 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	FGF17	O60258	216 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	ATP1A1	P05023	1023 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	PRCP	P42785	496 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	GLIPR1	P48060	266 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	TERF1	P54274	439 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	RUNX1T1	Q06455	604 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	CCDC6	Q16204	474 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	TMEM35A	Q53FP2	167 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	KRTCAP3	Q53RY4	240 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	ZNF805	Q5CZA5	627 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	SARM1	Q6SZW1	724 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	MARK2	Q7KZI7	788 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	ATG9A	Q7Z3C6	839 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	PXK	Q7Z7A4	578 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	CPLX4	Q7Z7G2	160 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	TMPRSS12	Q86WS5	348 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	CIART	Q8N365	385 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	PPHLN1	Q8NEY8	458 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	OR13A1	Q8NGR1	328 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	OR1J2	Q8NGS2	313 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	TRPC4AP	Q8TEL6	797 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	TMEM255B	Q8WV15	326 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	PGLYRP2	Q96PD5	576 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	EPYC	Q99645	322 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	TMEM39B	Q9GZU3	492 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	DIAPH3	Q9NSV4	1193 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	IRAK4	Q9NWZ3	460 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	STK39	Q9UEW8	545 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	POLG2	Q9UHN1	485 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	PIAS3	Q9Y6X2	628 aa		4.08	□□□□□ -1.76
PTPN12-215	ENST00000522115	FAM237B	A0A1B0GVD1	139 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	C1orf226	A1L170	272 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	FAM72C	H0Y354	149 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	SCGB1D1	O95968	90 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	CD4	P01730	458 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	POLR2C	P19387	275 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	MAN1A1	P33908	653 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	FMO5	P49326	533 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	PHEX	P78562	749 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	PCGF3	Q3KNV8	242 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	RAB6C	Q53S08	254 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	PDSS1	Q5T2R2	415 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	FAM72A	Q5TYM5	149 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	JADE1	Q6IE81	842 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	FAM72D	Q6L9T8	149 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115		Q75L30	129 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	FAM72B	Q86X60	149 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	SLC38A9	Q8NBW4	561 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	DMBX1	Q8NFW5	382 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	KCNG4	Q8TDN1	519 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	SLC38A5	Q8WUX1	472 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	SCRN2	Q96FV2	425 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	EGLN2	Q96KS0	407 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	RAB6C	Q9H0N0	254 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	TCF19	Q9Y242	345 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	KLHL20	Q9Y2M5	609 aa		4.07	□□□□□ -1.76
PTPN12-215	ENST00000522115	ABCC9	O60706	1549 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	EIF4E1B	A6NMX2	242 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115		A8MZ25	164 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	ATP2A1	O14983	1001 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	GRID2	O43424	1007 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	EPB41L2	O43491	1005 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	BUD23	O43709	281 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	MBD4	O95243	580 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	IGHV4-39	P01824	125 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	PAX1	P15863	534 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	GM2A	P17900	193 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	ACADL	P28330	430 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	TIMP3	P35625	211 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	CLCN3	P51790	818 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	ISL1	P61371	349 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	RPL24	P83731	157 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	SREBF2	Q12772	1141 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	LRMP	Q12912	555 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	ZNF852	Q6ZMS4	543 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	KCTD8	Q6ZWB6	473 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	PLEKHM3	Q6ZWE6	761 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	MAP7D3	Q8IWC1	876 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	C1orf74	Q96LT6	269 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	WDFY2	Q96P53	400 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	OLA1	Q9NTK5	396 aa	Known RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	MTMR10	Q9NXD2	777 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	ORC3	Q9UBD5	711 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	COPG2	Q9UBF2	871 aa		4.06	□□□□□ -1.76
PTPN12-215	ENST00000522115	MTMR6	Q9Y217	621 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms