RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ZNHIT2Q9UHR6 403 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 COL3A1P02461 1466 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 TMEM221A6NGB7 291 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 AKR1B15C9JRZ8 316 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 PTGESO14684 152 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 NDUFS7O75251 213 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF217O75362 1048 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 WISP2O76076 250 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 GGPS1O95749 300 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 NUDT3O95989 172 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 CCDC175P0C221 793 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 DANCRP0C864 163 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 PRF1P14222 555 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 HOXB2P14652 356 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 FBLP22087 321 aaKnown RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 HRH2P25021 359 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 FASLGP48023 281 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 POLGP54098 1239 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 CDH13P55290 713 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 HNRNPH2P55795 449 aaKnown RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 SIRPAP78324 504 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 RBP5P82980 135 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 GRSF1Q12849 480 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 COG2Q14746 738 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 KLHL26Q53HC5 615 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 PPP6R3Q5H9R7 873 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 MPP7Q5T2T1 576 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 GGNBP1Q5YKI7 109 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM109BQ6ICB4 259 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 KRT80Q6KB66 452 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 MFSD6Q6ZSS7 791 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 CHST3Q7LGC8 479 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 CACNA2D4Q7Z3S7 1137 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 RD3Q7Z3Z2 195 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 DNAJB7Q7Z6W7 309 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 CTU1Q7Z7A3 348 aaKnown RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 ANKRD13BQ86YJ7 626 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 EPHX4Q8IUS5 362 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 APPL2Q8NEU8 664 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR2AK2Q8NG84 335 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR1J2Q8NGS2 313 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 MPLKIPQ8TAP9 179 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 HM13Q8TCT9 377 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 RND1Q92730 232 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 PTERQ96BW5 349 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 VCPIP1Q96JH7 1222 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 HARBI1Q96MB7 349 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 ANKZF1Q9H8Y5 726 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 TUBA8Q9NY65 449 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR14J1Q9UGF5 321 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 AMACRQ9UHK6 382 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 HACL1Q9UJ83 578 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 RCOR1Q9UKL0 485 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 LIPGQ9Y5X9 500 aa3.43□□□□□ -1.86
HMGN1P28-201ENST00000521340 KCNU1A8MYU2 1149 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 B4DGG1 531 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 H0Y626 953 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 H3BQ06 376 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 CCDC188H7C350 402 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR10H2O60403 315 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZIC3O60481 467 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 SIX3O95343 332 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 BCL10O95999 233 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 TKTP29401 623 aaKnown RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 TLX1P31314 330 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 GP5P40197 560 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 LMAN1P49257 510 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ABATP80404 500 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 RUNX1T1Q06455 604 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 BFSP1Q12934 665 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 PPIGQ13427 754 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 CAMK2DQ13557 499 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 MVPQ14764 893 aaKnown RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 CCDC142Q17RM4 750 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 SETMARQ53H47 684 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 CST9LP1Q5W188 147 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 FRG2Q64ET8 278 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 DHRS7BQ6IAN0 325 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 TPRG1Q6ZUI0 275 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 Q75L30 129 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF534Q76KX8 674 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 MON1BQ7L1V2 547 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 SHFQ7M4L6 423 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 MAML2Q8IZL2 1156 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR8H3Q8N146 312 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF713Q8N859 430 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF548Q8NEK5 533 aaPredicted RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 PIGOQ8TEQ8 1089 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 TAAR8Q969N4 342 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF653Q96CK0 615 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 GFM1Q96RP9 751 aaKnown RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 PCYT2Q99447 389 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 GPATCH1Q9BRR8 931 aaKnown RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 TRMOQ9BU70 441 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 RTN4RQ9BZR6 473 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM234AQ9H0X4 552 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 ISCUQ9H1K1 167 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 RIOX1Q9H6W3 641 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 PLAC1Q9HBJ0 212 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms