RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 KDF1Q8NAX2 398 aaPredicted RBP20.44■□□□□ 0.86
TRIM35-203ENST00000521253 OR6C4Q8NGE1 309 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 ZDHHC1Q8WTX9 485 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 LRRC45Q96CN5 670 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 PDLIM2Q96JY6 352 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 VPS35Q96QK1 796 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 LRRC40Q9H9A6 602 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 ARNT2Q9HBZ2 717 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 TRIM39Q9HCM9 518 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 GLYATL1P3A0A0U1RQE8 302 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 TMEM8BA6NDV4 472 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 GAPDHSO14556 408 aaPredicted RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 STX7O15400 261 aaKnown RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 CEP104O60308 925 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 MTX2O75431 263 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 IFNB1P01574 187 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 LPOP22079 712 aaPredicted RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 CHRNA6Q15825 494 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 CCNG2Q16589 344 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 CHST15Q7LFX5 561 aaPredicted RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 C17orf82Q86X59 251 aaPredicted RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 PDCD7Q8N8D1 485 aaKnown RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 DTX3LQ8TDB6 740 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 BRSK1Q8TDC3 778 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 FEZ2Q9UHY8 353 aaPredicted RBP20.43■□□□□ 0.86
TRIM35-203ENST00000521253 KCTD3Q9Y597 815 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 RNF215Q9Y6U7 377 aa20.43■□□□□ 0.86
TRIM35-203ENST00000521253 C2orf81A6NN90 581 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 GPR39O43194 453 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 ZSCAN12O43309 604 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 GRID2O43424 1007 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A9O60656 530 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 AP2A1O95782 977 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 CAPNS1P04632 268 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 GLB1P16278 677 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A6P19224 532 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A1P22309 533 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A4P22310 534 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A3P35503 534 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A5P35504 534 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 MAZP56270 477 aaKnown RBP20.42■□□□□ 0.86
TRIM35-203ENST00000521253 PEX6Q13608 980 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 ST3GAL2Q16842 350 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 KHDC1Q4VXA5 237 aaKnown RBP20.42■□□□□ 0.86
TRIM35-203ENST00000521253 PRUNE1Q86TP1 453 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 OR4K2Q8NGD2 314 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 PATE1Q8WXA2 126 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 ZCCHC14Q8WYQ9 949 aaKnown RBP20.42■□□□□ 0.86
TRIM35-203ENST00000521253 DEPDC7Q96QD5 511 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A7Q9HAW7 530 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A10Q9HAW8 530 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 UGT1A8Q9HAW9 530 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.42■□□□□ 0.86
TRIM35-203ENST00000521253 ZKSCAN5Q9Y2L8 839 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 JRKLQ9Y4A0 524 aa20.42■□□□□ 0.86
TRIM35-203ENST00000521253 SCN8AQ9UQD0 1980 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 RP1P56715 2156 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 GPR89AB7ZAQ6 455 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 ECEL1O95672 775 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 CRTAMO95727 393 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 GPR89BP0CG08 455 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 ACP5P13686 325 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 ETS1P14921 441 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 CA5AP35218 305 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 LONRF2Q1L5Z9 754 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 DRICH1Q6PGQ1 229 aaPredicted RBP20.41■□□□□ 0.86
TRIM35-203ENST00000521253 NAGSQ8N159 534 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 GLIS1Q8NBF1 620 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 MDM1Q8TC05 714 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 MAIP1Q8WWC4 291 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 CCDC86Q9H6F5 360 aaKnown RBP20.41■□□□□ 0.86
TRIM35-203ENST00000521253 SYNDIG1Q9H7V2 258 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 ETNK1Q9HBU6 452 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 TRMT1Q9NXH9 659 aaKnown RBP20.41■□□□□ 0.86
TRIM35-203ENST00000521253 LRIT1Q9P2V4 623 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 APPL1Q9UKG1 709 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 KCNK6Q9Y257 313 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 PCDHB1Q9Y5F3 818 aa20.41■□□□□ 0.86
TRIM35-203ENST00000521253 NTN3O00634 580 aaPredicted RBP20.4■□□□□ 0.86
TRIM35-203ENST00000521253 CHUKO15111 745 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 PSMD3O43242 534 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 NUDT21O43809 227 aaKnown RBP20.4■□□□□ 0.86
TRIM35-203ENST00000521253 VEGFDO43915 354 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 CSO75390 466 aaKnown RBP20.4■□□□□ 0.86
TRIM35-203ENST00000521253 TCEA3O75764 348 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 TPH1P17752 444 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 ACTN2P35609 894 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 CCL7P80098 99 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 CRTC3Q6UUV7 619 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 RBM44Q6ZP01 1051 aaKnown RBP20.4■□□□□ 0.86
TRIM35-203ENST00000521253 ARL14Q8N4G2 192 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 CCDC89Q8N998 374 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 Q8N9G6 341 aaPredicted RBP20.4■□□□□ 0.86
TRIM35-203ENST00000521253 OR13C4Q8NGS5 318 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 WDR48Q8TAF3 677 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 GDAP1Q8TB36 358 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 PIH1D1Q9NWS0 290 aaKnown RBP20.4■□□□□ 0.86
TRIM35-203ENST00000521253 FKBPLQ9UIM3 349 aa20.4■□□□□ 0.86
TRIM35-203ENST00000521253 A0A1W2PQM1 296 aa20.39■□□□□ 0.85
TRIM35-203ENST00000521253 LDB2O43679 373 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms