RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 Q6ZSR6 202 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 TRMT10CQ7L0Y3 403 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SDCCAG8Q86SQ7 713 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PARGQ86W56 976 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 HEATR4Q86WZ0 1026 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PALM2Q8IXS6 379 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 NXPE1Q8N323 547 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 LRRN4CLQ8ND94 238 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 FBXO36Q8NEA4 188 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 OR56A4Q8NGH8 313 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 GSDMBQ8TAX9 411 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 IFT81Q8WYA0 676 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SNX19Q92543 992 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PIGKQ92643 395 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CDKL2Q92772 493 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 FUBP1Q96AE4 644 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZNF669Q96BR6 464 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CERS2Q96G23 380 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 LINC00615Q96LM1 132 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZNF778Q96MU6 729 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC6A18Q96N87 628 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 RHOXF2Q9BQY4 288 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SPATA16Q9BXB7 569 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 NUSAP1Q9BXS6 441 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 BPIFA1Q9NP55 256 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 AASDHPPTQ9NRN7 309 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 TMEM74BQ9NUR3 256 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 INTS10Q9NVR2 710 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 TRNAU1APQ9NX07 287 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZDHHC3Q9NYG2 299 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 FETUBQ9UGM5 382 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CD84Q9UIB8 345 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CORO1CQ9ULV4 474 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 KCTD3Q9Y597 815 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 MAD1L1Q9Y6D9 718 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 COMMD10Q9Y6G5 202 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CSNK1G3Q9Y6M4 447 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 KNL1Q8NG31 2342 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ADAMTS9Q9P2N4 1935 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 TDRD6O60522 2096 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CABIN1Q9Y6J0 2220 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 COL5A1P20908 1838 aaPredicted RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 A0A0U1RQS6 177 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 C17orf113A0A1B0GUU1 675 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CCDC162PA2VCL2 907 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 H3BM21 787 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 H3BMM5 538 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 K7ESM1 405 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARHGAP33O14559 1287 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CTIFO43310 598 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 RASGRP1O95267 797 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 VAPBO95292 243 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CER1O95813 267 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 GOT2P00505 430 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CSF2P04141 144 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 WNT1P04628 370 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PCCBP05166 539 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CEACAM5P06731 702 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ABHD2P08910 425 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZNF7P17097 686 aaPredicted RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 MAOBP27338 520 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARNTP27540 789 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 STX2P32856 288 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 LEPRP48357 1165 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARSDP51689 593 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CRADDP78560 199 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 MRPS25P82663 173 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 NHLH1Q02575 133 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 DMPKQ09013 629 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 MGAT5Q09328 741 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 TMEM115Q12893 351 aaPredicted RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC14A1Q13336 389 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 THOC5Q13769 683 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 GTF2H3Q13889 308 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 FZD2Q14332 565 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 MAP9Q49MG5 647 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 BCL7AQ4VC05 210 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 TRIM61Q5EBN2 209 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 NEPROQ6NW34 567 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 LVRNQ6Q4G3 990 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 FAM151BQ6UXP7 276 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 RFLNAQ6ZTI6 216 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC26A11Q86WA9 606 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CILP2Q8IUL8 1156 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 IGDCC3Q8IVU1 814 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 RBFAQ8N0V3 343 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC22A18ASQ8N1D0 253 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 FSTL5Q8N475 847 aaPredicted RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 OR13H1Q8NG92 308 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 OR6P1Q8NGX9 317 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 KLK6Q92876 244 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PKNOX2Q96KN3 472 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 FCRL3Q96P31 734 aaPredicted RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 AGAP2Q99490 1192 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 COPS8Q99627 209 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms