RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 METTL23Q86XA0 190 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 CEP57Q86XR8 500 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 MAML2Q8IZL2 1156 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 OR8H3Q8N146 312 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 SLC16A11Q8NCK7 471 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 C7orf57Q8NEG2 295 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 CFAP61Q8NHU2 1237 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 KIF18AQ8NI77 898 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 TAAR8Q969N4 342 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 FAM162AQ96A26 154 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 FER1L6-AS2Q96M78 137 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 GBP5Q96PP8 586 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 NAA11Q9BSU3 229 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 PPIL3Q9H2H8 161 aaKnown RBP5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 ANKZF1Q9H8Y5 726 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 C17orf75Q9HAS0 396 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 OLAHQ9NV23 265 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 HAO2Q9NYQ3 351 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 TSPYL4Q9UJ04 414 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 GOLGA6L9A6NEM1 432 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 H0Y626 953 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 H0YIN7 160 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 J3KR12 359 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 TIMM23O14925 209 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 IPO8O15397 1037 aaKnown RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 ASAP2O43150 1006 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZIC3O60481 467 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 BCL10O95999 233 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 SLPIP03973 132 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 CYP1A2P05177 515 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 FGF2P09038 288 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 ERCC2P18074 760 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 MUTP22033 750 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 STX2P32856 288 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 MC5RP33032 325 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 FOXM1Q08050 763 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 PTGR1Q14914 329 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 EFNB3Q15768 340 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 HYAL4Q2M3T9 481 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 DNTTIP2Q5QJE6 756 aaKnown RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 NSUN5P2Q63ZY6 315 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 PAPD4Q6PIY7 484 aaKnown RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 SHC4Q6S5L8 630 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 IQCHQ86VS3 1027 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZC3HC1Q86WB0 502 aaKnown RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 CEP97Q8IW35 865 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 BEST3Q8N1M1 668 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 PI4KAP1Q8N8J0 262 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 DEPDC1BQ8WUY9 529 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 DDB2Q92466 427 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 SIPA1Q96FS4 1042 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZNF830Q96NB3 372 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 NEK1Q96PY6 1258 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 GRPEL1Q9HAV7 217 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 SEBOXQ9HB31 216 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 PLAC1Q9HBJ0 212 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 MBNL1Q9NR56 388 aaKnown RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 TRNAU1APQ9NX07 287 aaKnown RBP5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 TAS2R14Q9NYV8 317 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 RASAL2Q9UJF2 1139 aa5.28□□□□□ -1.56
HMGB1P46-201ENST00000520062 ATXN2Q99700 1313 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 IGHV4-28A0A0C4DH34 117 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 EDDM13A0A1B0GTR0 161 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 CGB1A6NKQ9 187 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 CCDC188H7C350 402 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 WDR46O15213 610 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 NDUFS4O43181 175 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 PRAMEF11O60813 436 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 CREG1O75629 220 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 TRUB2O95900 331 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 FDPSP14324 419 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 HOXC8P31273 242 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 KRT2P35908 639 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 RPL3P39023 403 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 HNRNPH2P55795 449 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 DDR1Q08345 913 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 RALGDSQ12967 914 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 RBMS2Q15434 407 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 EZH2Q15910 746 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 FAM98BQ52LJ0 330 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 PET117Q6UWS5 81 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 CTU1Q7Z7A3 348 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 NRROSQ86YC3 692 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 FOXRED2Q8IWF2 684 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 AFAP1Q8N556 730 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 MIGA1Q8NAN2 632 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 SLC38A9Q8NBW4 561 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 RBM15BQ8NDT2 890 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 MAGEC3Q8TD91 643 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 WFIKKN2Q8TEU8 576 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 TEKT4Q8WW24 435 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 MRPS27Q92552 414 aaKnown RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 SPACA9Q96E40 222 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 URB1-AS1Q96HZ7 61 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms