RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SEPT6Q14141 434 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 ADGRG6Q86SQ4 1221 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 STYXQ8WUJ0 223 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 GLMNQ92990 594 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 ARFGAP3Q9NP61 516 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 NLE1Q9NVX2 485 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-217ENST00000518538 RNF14Q9UBS8 474 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 ZNHIT2Q9UHR6 403 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 GPR34Q9UPC5 381 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 U3KQA8 63 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 ZNF106Q9H2Y7 1883 aaKnown RBP21.77■■□□□ 1.08
VEGFA-217ENST00000518538 CACNA1AO00555 2505 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 MROH6A6NGR9 719 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 VEGFDO43915 354 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A9O60656 530 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 RFPL3O75679 317 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 SRP72O76094 671 aaKnown RBP21.76■■□□□ 1.07
VEGFA-217ENST00000518538 ECEL1O95672 775 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 ZNF8P17098 575 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A6P19224 532 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 TPSB2P20231 275 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A1P22309 533 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A4P22310 534 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 PMLP29590 882 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 CASQ1P31415 396 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A3P35503 534 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A5P35504 534 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 VPS41P49754 854 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 XIAPP98170 497 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 FOXK2Q01167 660 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 ILKQ13418 452 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 LAMB3Q13751 1172 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 LRP8Q14114 963 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 NR0B2Q15466 257 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 TPSAB1Q15661 275 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 KCTD19Q17RG1 926 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-217ENST00000518538 CERCAMQ5T4B2 595 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 ZNF648Q5T619 568 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-217ENST00000518538 NRROSQ86YC3 692 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 PNPLA1Q8N8W4 532 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 ZNF398Q8TD17 642 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 ADAMTS14Q8WXS8 1223 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 DNAJC1Q96KC8 554 aaKnown RBP21.76■■□□□ 1.07
VEGFA-217ENST00000518538 OR2AG1Q9H205 316 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A7Q9HAW7 530 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A10Q9HAW8 530 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 UGT1A8Q9HAW9 530 aa21.76■■□□□ 1.07
VEGFA-217ENST00000518538 HEATR9A2RTY3 570 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 H7C0S8 307 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 AP3B1O00203 1094 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 GPR39O43194 453 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 MTX2O75431 263 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 CDK4P11802 303 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 PAFAH1B1P43034 410 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 MAGEA6P43360 314 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 RPIAP49247 311 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 TMPRSS15P98073 1019 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 CTBSQ01459 385 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 KHDC1Q4VXA5 237 aaKnown RBP21.75■■□□□ 1.07
VEGFA-217ENST00000518538 LDLRAP1Q5SW96 308 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 SLC35F3Q8IY50 421 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 ARL10Q8N8L6 244 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 FAM46DQ8NEK8 389 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 DDHD1Q8NEL9 900 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 GDAP1Q8TB36 358 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 RANBP9Q96S59 729 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 DDX47Q9H0S4 455 aaKnown RBP21.75■■□□□ 1.07
VEGFA-217ENST00000518538 PCYT1BQ9Y5K3 369 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-217ENST00000518538 ST14Q9Y5Y6 855 aa21.75■■□□□ 1.07
VEGFA-217ENST00000518538 MYLKQ15746 1914 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 CHUKO15111 745 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 GRID2O43424 1007 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 MYF5P13349 255 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 PSMA3P25788 255 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 AK4P27144 223 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-217ENST00000518538 FOXC1Q12948 553 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 NFATC2Q13469 925 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 PEX6Q13608 980 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 KCNJ11Q14654 390 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 CCDC38Q502W7 563 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 CCDC157Q569K6 752 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 OGFOD3Q6PK18 319 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 SYT10Q6XYQ8 523 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 RAB44Q7Z6P3 723 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-217ENST00000518538 SLCO2A1Q92959 643 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 ZCCHC2Q9C0B9 1178 aaKnown RBP21.74■■□□□ 1.07
VEGFA-217ENST00000518538 ASB8Q9H765 288 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 TAAR2Q9P1P5 351 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 SIRPGQ9P1W8 387 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 PCYOX1Q9UHG3 505 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 PRKAB1Q9Y478 270 aa21.74■■□□□ 1.07
VEGFA-217ENST00000518538 EME2A4GXA9 379 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-217ENST00000518538 CDK14O94921 469 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 ITGALP20701 1170 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 ADRA1DP25100 572 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 CA5AP35218 305 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 ACTR1BP42025 376 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 ACTR1AP61163 376 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 TMEM115Q12893 351 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-217ENST00000518538 SKIDA1Q1XH10 827 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms