RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 XIAPP98170 497 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 TMEM115Q12893 351 aaPredicted RBP11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 LRP8Q14114 963 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 NR0B2Q15466 257 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 TCEA2Q15560 299 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 CYP1B1Q16678 543 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 CCDC157Q569K6 752 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 TTC27Q6P3X3 843 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 DHRS13Q6UX07 377 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 MARK2Q7KZI7 788 aaKnown RBP11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 ADGRG6Q86SQ4 1221 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 TMPRSS12Q86WS5 348 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 SLC35F3Q8IY50 421 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 CACTIN-AS1Q8N1I8 211 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 GALNT15Q8N3T1 639 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 OR52K1Q8NGK4 314 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 ZNF398Q8TD17 642 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 OR2AG1Q9H205 316 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 DPEP2Q9H4A9 486 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 GULP1Q9UBP9 304 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 APPL1Q9UKG1 709 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 PLEKHM1Q9Y4G2 1056 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 NEUROG3Q9Y4Z2 214 aa11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCARNA20-201ENST00000516768 CPED1A4D0V7 1026 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 MROH6A6NGR9 719 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 E7EVH7 732 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 GRID2O43424 1007 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 NOBOXO60393 691 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 SRP72O76094 671 aaKnown RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 CDK14O94921 469 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 APRTP07741 180 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 AK4P27144 223 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 COILP38432 576 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 HADHAP40939 763 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 GRIA1P42261 906 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 CDH17Q12864 832 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 PEX6Q13608 980 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 ITGA9Q13797 1035 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 ZNF648Q5T619 568 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 GUSBP11Q6P575 273 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 FAM151BQ6UXP7 276 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 CCNI2Q6ZMN8 369 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 CHST15Q7LFX5 561 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 C17orf82Q86X59 251 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 GALNT13Q8IUC8 556 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 PHYKPLQ8IUZ5 450 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 ARL10Q8N8L6 244 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 DNAAF3Q8N9W5 541 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 OR6C4Q8NGE1 309 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 OR13C4Q8NGS5 318 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 STYXQ8WUJ0 223 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 OR2M4Q96R27 311 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 SUDS3Q9H7L9 328 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 ARFGAP3Q9NP61 516 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 CASS4Q9NQ75 786 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 NLE1Q9NVX2 485 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 TAAR2Q9P1P5 351 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 PRKAB1Q9Y478 270 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 PCYT1BQ9Y5K3 369 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 ASXL3Q9C0F0 2248 aa11.03□□□□□ -0.64
SCARNA20-201ENST00000516768 H7C0S8 307 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 OPA1O60313 960 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 MTX2O75431 263 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 JUPP14923 745 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 PNLIPP16233 465 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 GLB1P16278 677 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CA5AP35218 305 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 LMAN1P49257 510 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CLCNKAP51800 687 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CDK16Q00536 496 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 INSM1Q01101 510 aaPredicted RBP11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 LAMB3Q13751 1172 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 POU6F1Q14863 301 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SKIDA1Q1XH10 827 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 KHDC1Q4VXA5 237 aaKnown RBP11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 LDLRAP1Q5SW96 308 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CERCAMQ5T4B2 595 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CCDC137Q6PK04 289 aaKnown RBP11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CREG2Q8IUH2 290 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SFTPA2Q8IWL1 248 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 GDAP1Q8TB36 358 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 IFI44Q8TCB0 444 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 ZDHHC1Q8WTX9 485 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 NAT6Q93015 286 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 CDKN2AIPNLQ96HQ2 116 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 TTC25Q96NG3 672 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 ABCG4Q9H172 646 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 ASB8Q9H765 288 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 EIF2B3Q9NR50 452 aaKnown RBP11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SMOXQ9NWM0 555 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 SIRPGQ9P1W8 387 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 FKBPLQ9UIM3 349 aa11.02□□□□□ -0.65
SCARNA20-201ENST00000516768 KLK13Q9UKR3 277 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms