RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 HLA-DQA2P01906 255 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ALDOAP04075 364 aaKnown RBP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 SUPT20HL2P0C7V6 817 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF286BP0CG31 522 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 IL1R1P14778 569 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 POLR2CP19387 275 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 COL8A2P25067 703 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 PRELPP51888 382 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 TAS2R50P59544 299 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF543Q08ER8 600 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAPQ12884 760 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 MYLK3Q32MK0 819 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 CDONQ4KMG0 1287 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 IQCCQ4KMZ1 466 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 SOGA3Q5TF21 947 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 MARC1Q5VT66 337 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 NFRKBQ6P4R8 1299 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 TLDC1Q6P9B6 456 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 SASS6Q6UVJ0 657 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 GDPGP1Q6ZNW5 385 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 KRT27Q7Z3Y8 459 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 RNF144BQ7Z419 303 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 HOGA1Q86XE5 327 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 LACC1Q8IV20 430 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCYOX1LQ8NBM8 494 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ABHD5Q8WTS1 349 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 HPSE2Q8WWQ2 592 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 PPM1EQ8WY54 764 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 TEKT5Q96M29 485 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 YME1L1Q96TA2 773 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 MTERF1Q99551 399 aaKnown RBP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF2Q9BSG1 426 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 XRN2Q9H0D6 950 aaKnown RBP eCLIP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 PRDM11Q9NQV5 511 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 CNGB3Q9NQW8 809 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF331Q9NQX6 463 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 CYSLTR2Q9NS75 346 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 INTS9Q9NV88 658 aaKnown RBP-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 NDE1Q9NXR1 346 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ANKRD10Q9NXR5 420 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 FLRT3Q9NZU0 649 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ABCG2Q9UNQ0 655 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 MAPRE3Q9UPY8 281 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 WDR37Q9Y2I8 494 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 ASTN1O14525 1302 aa-0.9□□□□□ -2.55
RNU6-542P-201ENST00000516405 A0A087WZ62 844 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 GXYLT2A0PJZ3 443 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 A8MV72 311 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 NKX2-8O15522 239 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 PNPP00491 289 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 VIL1P09327 827 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAM200BP0CF97 657 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 TXNP10599 105 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 KITP10721 976 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 HOXB9P17482 250 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 CTPS1P17812 591 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ITGAXP20702 1163 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 IBSPP21815 317 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 DDIT3P35638 169 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 GNB2P62879 340 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 CYCSP99999 105 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 STRN3Q13033 797 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 PSG7Q13046 419 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 SMAD1Q15797 465 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 CCDC27Q2M243 656 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 P3H1Q32P28 736 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 TMEM35AQ53FP2 167 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 LINC00242Q5T6M2 205 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF658Q5TYW1 1059 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 MSANTD2Q6P1R3 559 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC36A4Q6YBV0 504 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAM131BQ86XD5 332 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 MYOCDQ8IZQ8 938 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF786Q8N393 782 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 TMEM116Q8NCL8 245 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF397Q8NF99 534 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 NUP37Q8NFH4 326 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 OR5AP2Q8NGF4 316 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 OR5R1Q8NH85 324 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 SMCR8Q8TEV9 937 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 CLEC4CQ8WTT0 213 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC22A17Q8WUG5 538 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 MCRS1Q96EZ8 462 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF578Q96N58 590 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 FNBP1Q96RU3 617 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 SRPK1Q96SB4 655 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 EIF3CQ99613 913 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 APOL2Q9BQE5 337 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 CHCHD5Q9BSY4 110 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 IFT27Q9BW83 186 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 HDHD5Q9BXW7 423 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 DEFB126Q9BYW3 111 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 KCNN2Q9H2S1 579 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ATP13A3Q9H7F0 1226 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ISG20L2Q9H9L3 353 aaKnown RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 FBXO28Q9NVF7 368 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 VNN3Q9NY84 501 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF835Q9Y2P0 537 aa-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 UBE2J1Q9Y385 318 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-542P-201ENST00000516405 MICAL3Q7RTP6 2002 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms