RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TXNDC11Q6PKC3 985 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ZYG11AQ6WRX3 759 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 LIPIQ6XZB0 460 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RFLNAQ6ZTI6 216 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 Q6ZVL8 140 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ERN2Q76MJ5 926 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PIGWQ7Z7B1 504 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PIM3Q86V86 326 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 C10orf107Q8IVU9 208 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RAVER1Q8IY67 606 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 NRSN1Q8IZ57 195 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CACNA2D3Q8IZS8 1091 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 FSTL5Q8N475 847 aaPredicted RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CCDC197Q8NCU1 140 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DTX3LQ8TDB6 740 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 HEXDCQ8WVB3 486 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PPM1EQ8WY54 764 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KCNJ9Q92806 393 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 HLA-CQ95604 372 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RAB7BQ96AH8 199 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 FAM136AQ96C01 138 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 UBXN10Q96LJ8 280 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 BIRC8Q96P09 236 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GPR78Q96P69 363 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CDX2Q99626 313 aaPredicted RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 COPS8Q99627 209 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GPR21Q99679 349 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ELAC2Q9BQ52 826 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 MRPL57Q9BQC6 102 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 WRAP53Q9BUR4 548 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TSSK1BQ9BXA7 367 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPATA16Q9BXB7 569 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 HDAC8Q9BY41 377 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RSPH9Q9H1X1 276 aaPredicted RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 P2RY12Q9H244 342 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 MRPL46Q9H2W6 279 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 FAM83DQ9H4H8 585 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SLCO1B3Q9NPD5 702 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 IGSF5Q9NSI5 407 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ZDHHC3Q9NYG2 299 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CPSF2Q9P2I0 782 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 XPR1Q9UBH6 696 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CD84Q9UIB8 345 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TRMT6Q9UJA5 497 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GNPTGQ9UJJ9 305 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 OAS3Q9Y6K5 1087 aaKnown RBP7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 F5P12259 2224 aa7.58□□□□□ -1.2
SCARNA20.1-201ENST00000516009 XIRP2A4UGR9 3374 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ANKRD12Q6UB98 2062 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 G3V2L1 256 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TK2O00142 265 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 EBAG9O00559 213 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 WNT9AO14904 365 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 AREL1O15033 823 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPINT1O43278 529 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 LZTS3O60299 673 aaPredicted RBP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SNX3O60493 162 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TRIM13O60858 407 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 H2AFYO75367 372 aaKnown RBP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ADH1BP00325 375 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 EGFP01133 1207 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SERPINE1P05121 402 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ASGR2P07307 311 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RBP1P09455 135 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TROVE2P10155 538 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RALBP11234 206 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 FGF3P11487 239 aaPredicted RBP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GLULP15104 373 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ZNF37AP17032 561 aaPredicted RBP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TFEBP19484 476 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CHRM3P20309 590 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 C5AR1P21730 350 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ETV3P41162 512 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 NSG1P42857 185 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 METAP1P53582 386 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PRKAA2P54646 552 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TIAL1Q01085 375 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SATB1Q01826 763 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CCDC15Q0P6D6 951 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ASPHQ12797 758 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GRSF1Q12849 480 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CNTN1Q12860 1018 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ACAP2Q15057 778 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SMAD2Q15796 467 aaKnown RBP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CST6Q15828 149 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ZSCAN26Q16670 478 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TMEM52BQ4KMG9 183 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 C2orf27AQ580R0 203 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TECRLQ5HYJ1 363 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TMEM196Q5HYL7 178 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GPRC6AQ5T6X5 926 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PAQR3Q6TCH7 311 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TMEM207Q6UWW9 146 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 OTOAQ7RTW8 1153 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TRMT11Q7Z4G4 463 aaKnown RBP7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPATA21Q7Z572 469 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TECPR1Q7Z6L1 1165 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPATA6LQ8N4H0 392 aa7.57□□□□□ -1.2
SCARNA20.1-201ENST00000516009 NKAPQ8N5F7 415 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms