RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C3orf18Q9UK00 162 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 TSPAN16Q9UKR8 245 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
SMAD1-215ENST00000515385 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 PNMA8CA0A1B0GUJ8 204 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 PTGES3LE9PB15 166 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 PFKMP08237 780 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CYP2C8P10632 490 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 GOT1P17174 413 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 JUNDP17535 347 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CYP2B6P20813 491 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 HTR3AP46098 478 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SEPHS1P49903 392 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CXCR4P61073 352 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 BNC1Q01954 994 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CHRNB3Q05901 458 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 PAFAH1B3Q15102 231 aaKnown RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 RPS6KA2Q15349 733 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 ZC3H12BQ5HYM0 836 aaKnown RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CERCAMQ5T4B2 595 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 RALGPS2Q86X27 583 aaPredicted RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 METTL4Q8N3J2 472 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CCDC185Q8N715 623 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 JPH3Q8WXH2 748 aaPredicted RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 PSKH2Q96QS6 385 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CCNB1IP1Q9NPC3 277 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 DNAJB9Q9UBS3 223 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 HMGXB4Q9UGU5 601 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 TRHDEQ9UKU6 1024 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 MKLN1Q9UL63 735 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 OAS3Q9Y6K5 1087 aaKnown RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 LOC100130705A0A1B0GUX0 176 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SLC16A6O15403 523 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 MSCO60682 206 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 MED26O95402 600 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 PIGFQ07326 219 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 INCA1Q0VD86 236 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CDH17Q12864 832 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CAPSQ13938 189 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 GALNT3Q14435 633 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 POU6F1Q14863 301 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 UGT3A2Q3SY77 523 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 LAIR2Q6ISS4 152 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SYCE2Q6PIF2 218 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 IDO2Q6ZQW0 420 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 GDPD3Q7L5L3 318 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 ADAMTSL2Q86TH1 951 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 IFNEQ86WN2 208 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 NT5DC4Q86YG4 428 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 CEP97Q8IW35 865 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 MCOLN3Q8TDD5 553 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 L3HYPDHQ96EM0 354 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 UGT2B28Q9BY64 529 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 NIFKQ9BYG3 293 aaKnown RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 ALOXE3Q9BYJ1 711 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 PRDM12Q9H4Q4 367 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 GSTO2Q9H4Y5 243 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
SMAD1-215ENST00000515385 TNFRSF12AQ9NP84 129 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 SCN3BQ9NY72 215 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 OPTCQ9UBM4 332 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
SMAD1-215ENST00000515385 ARHGAP33O14559 1287 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NCAM2O15394 837 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 SNX2O60749 519 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 EEDO75530 441 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 PRKD3O94806 890 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LRIG2O94898 1065 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 FGF4P08620 206 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 F7P08709 466 aaPredicted RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NCK1P16333 377 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LBPP18428 481 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 CYP3A5P20815 502 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 IL32P24001 234 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NMBRP28336 390 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 MTHFRP42898 656 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 KCNK10P57789 538 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NCS1P62166 190 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LSM3P62310 102 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 CLCA4Q14CN2 919 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NPTX1Q15818 432 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 GOLGA7BQ2TAP0 167 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NAPEPLDQ6IQ20 393 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms