RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 LDOC1O95751 146 aaPredicted RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 ITGALP20701 1170 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 GNPDA1P46926 289 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 POLD2P49005 469 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 NOVA1P51513 510 aaKnown RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 SESN2P58004 480 aaPredicted RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 XIAPP98170 497 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 NFATC2Q13469 925 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 LRP8Q14114 963 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 TRIP6Q15654 476 aaKnown RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 WHAMMP3Q1A5X7 153 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 PYCR3Q53H96 274 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 TSTD2Q5T7W7 516 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 SNX20Q7Z614 316 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 GLRX5Q86SX6 157 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 TRIM74Q86UV6 250 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 JAMLQ86YT9 394 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 GALNT13Q8IUC8 556 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 FAM181AQ8N9Y4 354 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 GDAP1Q8TB36 358 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 BAHD1Q8TBE0 780 aaPredicted RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 HEXDCQ8WVB3 486 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 ZNF592Q92610 1267 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 GLMNQ92990 594 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 DNAJC1Q96KC8 554 aaKnown RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 KRT12Q99456 494 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 GSDMCQ9BYG8 508 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 ZCCHC2Q9C0B9 1178 aaKnown RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 ASB8Q9H765 288 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 FTSJ1Q9UET6 329 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 BTBD3Q9Y2F9 522 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 TCAF1Q9Y4C2 921 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 OAS3Q9Y6K5 1087 aaKnown RBP14.13□□□□□ -0.15
NUP54-216ENST00000514901 SLC30A1Q9Y6M5 507 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 SCN8AQ9UQD0 1980 aa14.13□□□□□ -0.15
NUP54-216ENST00000514901 TCRBV7S3A2A0A539 114 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 MAGEB16A2A368 324 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 FAM187AA6NFU0 413 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 AGAP14A8MT82 685 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 GAPDHSO14556 408 aaPredicted RBP14.12□□□□□ -0.15
NUP54-216ENST00000514901 DNALI1O14645 258 aaPredicted RBP14.12□□□□□ -0.15
NUP54-216ENST00000514901 YY2O15391 372 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 NUAK1O60285 661 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A9O60656 530 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 FUCA1P04066 466 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A6P19224 532 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A1P22309 533 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A4P22310 534 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A3P35503 534 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A5P35504 534 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 TMEM115Q12893 351 aaPredicted RBP14.12□□□□□ -0.15
NUP54-216ENST00000514901 ILF3Q12906 894 aaKnown RBP eCLIP14.12□□□□□ -0.15
NUP54-216ENST00000514901 C1orf61Q13536 156 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 GTF2H3Q13889 308 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 CCDC38Q502W7 563 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 RNASEH2BQ5TBB1 312 aaKnown RBP14.12□□□□□ -0.15
NUP54-216ENST00000514901 ANKRD22Q5VYY1 191 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 ZCCHC8Q6NZY4 707 aaKnown RBP14.12□□□□□ -0.15
NUP54-216ENST00000514901 DGLUCYQ7Z3D6 616 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 TAF8Q7Z7C8 310 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 ADGRG6Q86SQ4 1221 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 HOOK3Q86VS8 718 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 NAT8LQ8N9F0 302 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 DDHD1Q8NEL9 900 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 GPBAR1Q8TDU6 330 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 TTC25Q96NG3 672 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 CAMK1GQ96NX5 476 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 OR2M4Q96R27 311 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 CLPBQ9H078 707 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 TMEM168Q9H0V1 697 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 OR2AG1Q9H205 316 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A7Q9HAW7 530 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A10Q9HAW8 530 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 UGT1A8Q9HAW9 530 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 MRM3Q9HC36 420 aaKnown RBP14.12□□□□□ -0.15
NUP54-216ENST00000514901 ATXN10Q9UBB4 475 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 ZNHIT2Q9UHR6 403 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 CRLS1Q9UJA2 301 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 TMPRSS11EQ9UL52 423 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 GPSM3Q9Y4H4 160 aa14.12□□□□□ -0.15
NUP54-216ENST00000514901 KNTC1P50748 2209 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 SDR42E2A6NKP2 422 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 TRIM38O00635 465 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 CHUKO15111 745 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 FFAR2O15552 330 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 TTI1O43156 1089 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 GRID2O43424 1007 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 SIGLEC6O43699 453 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 DNAJC6O75061 913 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 CDK14O94921 469 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 GIMD1P0DJR0 217 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 RALBP11234 206 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 ZNF8P17098 575 aaPredicted RBP14.11□□□□□ -0.15
NUP54-216ENST00000514901 MC4RP32245 332 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 RPIAP49247 311 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 DUSP3P51452 185 aaPredicted RBP14.11□□□□□ -0.15
NUP54-216ENST00000514901 TERF1P54274 439 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 ACVR1Q04771 509 aa14.11□□□□□ -0.15
NUP54-216ENST00000514901 CACNG1Q06432 222 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms