RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 KIAA1024LP59773 190 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 SARNPP82979 210 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 C1orf61Q13536 156 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 PLA2G4EQ3MJ16 856 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ZRANB3Q5FWF4 1079 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 PCID2Q5JVF3 399 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 TEX35Q5T0J7 233 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 PSAPL1Q6NUJ1 521 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ZDHHC24Q6UX98 284 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 LDB1Q86U70 411 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 IQCHQ86VS3 1027 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ANKMY2Q8IV38 441 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 IGDCC3Q8IVU1 814 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 PHACTR4Q8IZ21 702 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 GDAP1Q8TB36 358 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 STYXQ8WUJ0 223 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 GLYATL1Q969I3 302 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 HDAC10Q969S8 669 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 CFAP36Q96G28 342 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 CDKN2AIPNLQ96HQ2 116 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 COX14Q96I36 57 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ELF4Q99607 663 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 RHOXF2Q9BQY4 288 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ZSCAN5AQ9BUG6 496 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 FRMD8Q9BZ67 464 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 RAB17Q9H0T7 212 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 CYP4F12Q9HCS2 524 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 RAD18Q9NS91 495 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 UCKL1Q9NWZ5 548 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 SAMD15Q9P1V8 674 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 CRLS1Q9UJA2 301 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 UTP11Q9Y3A2 253 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.85
TOPBP1-209ENST00000513818 A0A1B0GTQ1 180 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 C4orf47A7E2U8 309 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CDX4O14627 284 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 MAGEC1O60732 1142 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 LRP3O75074 770 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC25A14O95258 325 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 RASGRP1O95267 797 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CER1O95813 267 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 GOT2P00505 430 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 FUCA1P04066 466 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CEACAM5P06731 702 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 MLNP12872 115 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 JUNDP17535 347 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 ITGALP20701 1170 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 ARNTP27540 789 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 HTR1BP28222 390 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 EPHA8P29322 1005 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 AKT1P31749 480 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 FOXN2P32314 431 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 TRIM23P36406 574 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CCT8P50990 548 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SRP54P61011 504 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 YPEL5P62699 121 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 OVGP1Q12889 678 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 BNIP3Q12983 259 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CALCOCO2Q13137 446 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 NFATC2Q13469 925 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SEMA3AQ14563 771 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 HIF1AQ16665 826 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF423Q2M1K9 1284 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 GPRC6AQ5T6X5 926 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CRTC3Q6UUV7 619 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CAPN12Q6ZSI9 719 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 DET1Q7L5Y6 550 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CCDC25Q86WR0 208 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 PHYKPLQ8IUZ5 450 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 GSPT2Q8IYD1 628 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 PIANPQ8IYJ0 282 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 UNC5BQ8IZJ1 945 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 OTUD6BQ8N6M0 293 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 OR56A4Q8NGH8 313 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 OR6P1Q8NGX9 317 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 FBXO25Q8TCJ0 367 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF398Q8TD17 642 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SKA1Q96BD8 255 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 HIC2Q96JB3 615 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SIGLEC10Q96LC7 697 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 FCRL3Q96P31 734 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 LRRC61Q9BV99 259 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 BOCQ9BWV1 1114 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 OR2AG1Q9H205 316 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 CARS2Q9HA77 564 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 EPB41L5Q9HCM4 733 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 TMEM9BQ9NQ34 198 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 TM7SF3Q9NS93 570 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 TREX1Q9NSU2 369 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 KCTD5Q9NXV2 234 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 MARCH4Q9P2E8 410 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC17A6Q9P2U8 582 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 ATXN10Q9UBB4 475 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 APOBEC3BQ9UH17 382 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SUFUQ9UMX1 484 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SOX13Q9UN79 622 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 PLEKHM1Q9Y4G2 1056 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC30A1Q9Y6M5 507 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms