RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MZF1P28698 734 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 TIE1P35590 1138 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 COLEC12Q5KU26 742 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CDHR3Q6ZTQ4 885 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 GALNT5Q7Z7M9 940 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ALDH16A1Q8IZ83 802 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 LGI2Q8N0V4 545 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 OR8H1Q8NGG4 311 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 OR52K2Q8NGK3 314 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 MYLPFQ96A32 169 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 LENG9Q96B70 501 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 MARCH2Q9P0N8 246 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ZMYM5Q9UJ78 669 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 FAM240BA0A1B0GVZ2 78 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 XYLBO75191 536 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 PGLSO95336 258 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 FGF3P11487 239 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 POLR2JP52435 117 aaKnown RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 HIST2H2ACQ16777 129 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 HIST2H2AA3Q6FI13 130 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ARMC6Q6NXE6 501 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 MZT2AQ6P582 158 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 CHSY3Q70JA7 882 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 CDYL2Q8N8U2 506 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 CMASQ8NFW8 434 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 LPPQ93052 612 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 EFHD2Q96C19 240 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 MFSD3Q96ES6 412 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 SNX7Q9UNH6 387 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 TNPO3Q9Y5L0 923 aaKnown RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 YES1P07947 543 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ERCC2P18074 760 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 NRLP54845 237 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 PCLAFQ15004 111 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 C5orf22Q49AR2 442 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 NOMO2Q5JPE7 1267 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 CLEC6AQ6EIG7 209 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 AHSA2Q719I0 299 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 EIF3MQ7L2H7 374 aaKnown RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 B3GALNT2Q8NCR0 500 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 LPCAT1Q8NF37 534 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 BORCS6Q96GS4 357 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 GPR20Q99678 358 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 YIPF2Q9BWQ6 316 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 TDRD1Q9BXT4 1180 aaKnown RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 CHRAC1Q9NRG0 131 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ABCC13Q9NSE7 274 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ZNF222Q9UK12 451 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 SSR3Q9UNL2 185 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 E7ESA3 106 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 UBXN8O00124 270 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 RSL1D1O76021 490 aaKnown RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 OXSR1O95747 527 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 GSTT2P0CG29 244 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 GSTT2BP0CG30 244 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 AKR1D1P51857 326 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 FBXW4P57775 412 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 SRP54P61011 504 aaKnown RBP11.19□□□□□ -0.62
TCOF1-211ENST00000513346 JAG1P78504 1218 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 SEMA5AQ13591 1074 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 IGDCC3Q8IVU1 814 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 TRIM48Q8IWZ4 208 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 FBXL20Q96IG2 436 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 ZNF558Q96NG5 402 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 CNTN6Q9UQ52 1028 aa11.19□□□□□ -0.62
TCOF1-211ENST00000513346 H3BN98 237 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 METTL18O95568 372 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 FGFR1P11362 822 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 GNG2P59768 71 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 ZSWIM7Q19AV6 140 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 PABPC1LQ4VXU2 614 aaKnown RBP11.18□□□□□ -0.62
TCOF1-211ENST00000513346 TNFAIP8L3Q5GJ75 292 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 BICRALQ6AI39 1079 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 GPRIN3Q6ZVF9 776 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 GPR180Q86V85 440 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 MPP5Q8N3R9 675 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 NKAPQ8N5F7 415 aaKnown RBP11.18□□□□□ -0.62
TCOF1-211ENST00000513346 TWIST2Q8WVJ9 160 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 ASZ1Q8WWH4 475 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 AP3S1Q92572 193 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 AZIN2Q96A70 460 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 TADA1Q96BN2 335 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 PRRG3Q9BZD7 231 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 GMIPQ9P107 970 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 CDC14AQ9UNH5 594 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 MRPL42Q9Y6G3 142 aaKnown RBP11.18□□□□□ -0.62
TCOF1-211ENST00000513346 MDM4O15151 490 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 EPN2O95208 641 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-211ENST00000513346 ABATP80404 500 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 PLEKHG6Q3KR16 790 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 COLGALT2Q8IYK4 626 aa11.18□□□□□ -0.62
TCOF1-211ENST00000513346 ZDHHC14Q8IZN3 488 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms